RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 PRKAG3Q9UGI9 489 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 KLRC2P26717 231 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 GRIA3P42263 894 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 AQP4P55087 323 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 XYLT2Q9H1B5 865 aa13.65□□□□□ -0.22
TMEM248-201ENST00000341567 SCHIP1Q9P0W5 487 aaPredicted RBP13.65□□□□□ -0.22
TMEM248-201ENST00000341567 RPL26L1Q9UNX3 145 aaKnown RBP13.65□□□□□ -0.22
TMEM248-201ENST00000341567 BTAF1O14981 1849 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 SEMG2Q02383 582 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TRAF2Q12933 501 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 CCDC85BQ15834 202 aaPredicted RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 LINGO4Q6UY18 593 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 DHFR2Q86XF0 187 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ZC3H3Q8IXZ2 948 aaKnown RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PALMDQ9NP74 551 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ZNF358Q9NW07 568 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 WWOXQ9NZC7 414 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 CROTQ9UKG9 612 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TRHDEQ9UKU6 1024 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 DEAF1O75398 565 aaPredicted RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 DAB1O75553 588 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TOP3BO95985 862 aaKnown RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 WNT3AP56704 352 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 NOGQ13253 232 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ZNF567Q8N184 647 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 SNX31Q8N9S9 440 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ARHGAP39Q9C0H5 1083 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 NSMCE4AQ9NXX6 385 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 RRN3Q9NYV6 651 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 DOLKQ9UPQ8 538 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 GIT1Q9Y2X7 761 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TJP1Q07157 1748 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 TBC1D4O60343 1298 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 MTA2O94776 668 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PIGRP01833 764 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 CTPS1P17812 591 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 HDCP19113 662 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 EPHB3P54753 998 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ZIK1Q3SY52 487 aaPredicted RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
TMEM248-201ENST00000341567 NPAS2Q99743 824 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
TMEM248-201ENST00000341567 SIN3BO75182 1162 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FKBP9O95302 570 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ZBTB48P10074 688 aaPredicted RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PPP3CCP48454 512 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 RPL14P50914 215 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 USP46P62068 366 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FKBP1BP68106 108 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PFKFB4Q16877 469 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FKBP9P1Q75LS8 142 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 BNIPLQ7Z465 357 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 GLT6D1Q7Z4J2 308 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 HEATR4Q86WZ0 1026 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 KBTBD2Q8IY47 623 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FNIP1Q8TF40 1166 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 C16orf70Q9BSU1 422 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 COG4Q9H9E3 785 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PIGVQ9NUD9 493 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 NRP1O14786 923 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 SERPINH1P50454 418 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 HADHBP55084 474 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ZNF460Q14592 562 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 SYTL3Q4VX76 610 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PRSS55Q6UWB4 352 aaPredicted RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 WDTC1Q8N5D0 677 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 BANPQ8N9N5 519 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ACE2Q9BYF1 805 aaPredicted RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CLPBQ9H078 707 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 SMIM31A0A1B0GVY4 71 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 HACD1B0YJ81 288 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ATG7O95352 703 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 GRIA4P48058 902 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 WASHC5Q12768 1159 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms