RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SNRNP25Q9BV90 132 aaKnown RBP20.45■□□□□ 0.86
SYNE2-201ENST00000341472 LRRC19Q9H756 370 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 UBA2Q9UBT2 640 aaPredicted RBP20.45■□□□□ 0.86
SYNE2-201ENST00000341472 CAPN11Q9UMQ6 739 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 MFHAS1Q9Y4C4 1052 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 IGLON5A6NGN9 336 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ENC1O14682 589 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 SERPING1P05155 500 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ABL2P42684 1182 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 FGL2Q14314 439 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 PPP6R3Q5H9R7 873 aaPredicted RBP20.44■□□□□ 0.86
SYNE2-201ENST00000341472 HGSNATQ68CP4 663 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 Q6ZSR6 202 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ABI3BPQ7Z7G0 1075 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 DCP2Q8IU60 420 aaKnown RBP20.44■□□□□ 0.86
SYNE2-201ENST00000341472 OR13H1Q8NG92 308 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 VOPP1Q96AW1 172 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ARHGEF26Q96DR7 871 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 CELF6Q96J87 481 aaKnown RBP20.44■□□□□ 0.86
SYNE2-201ENST00000341472 BMFQ96LC9 184 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 PEBP4Q96S96 227 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 KCTD15Q96SI1 283 aaPredicted RBP20.44■□□□□ 0.86
SYNE2-201ENST00000341472 C1QTNF2Q9BXJ5 285 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 SLC39A8Q9C0K1 460 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 IFNKQ9P0W0 207 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ZMIZ1Q9ULJ6 1067 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 LUC7L2Q9Y383 392 aaKnown RBP20.44■□□□□ 0.86
SYNE2-201ENST00000341472 USP24Q9UPU5 2620 aa20.44■□□□□ 0.86
SYNE2-201ENST00000341472 ARHGAP42A6NI28 874 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 J3KR12 359 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 ERCC2P18074 760 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 PCK1P35558 622 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 HCAR3P49019 387 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 PAPOLAP51003 745 aaKnown RBP20.43■□□□□ 0.86
SYNE2-201ENST00000341472 ZNF135P52742 658 aaPredicted RBP20.43■□□□□ 0.86
SYNE2-201ENST00000341472 ACAP1Q15027 740 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 ZSCAN23Q3MJ62 389 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 BOLA3Q53S33 107 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 RFX8Q6ZV50 586 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 ASB12Q8WXK4 309 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 LENG8Q96PV6 779 aaPredicted RBP20.43■□□□□ 0.86
SYNE2-201ENST00000341472 CALN1Q9BXU9 219 aa20.43■□□□□ 0.86
SYNE2-201ENST00000341472 RAD51BO15315 384 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 PRAMEF11O60813 436 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 LRCH4O75427 683 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 TIMP2P16035 220 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 GCNT7Q6ZNI0 430 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 KANSL1Q7Z3B3 1105 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 GALNT15Q8N3T1 639 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 CPEB1Q9BZB8 566 aaKnown RBP20.42■□□□□ 0.86
SYNE2-201ENST00000341472 DKK3Q9UBP4 350 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 PCDHGA1Q9Y5H4 931 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 FRYQ5TBA9 3013 aa20.42■□□□□ 0.86
SYNE2-201ENST00000341472 POM121BA6NF01 834 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 A6NNZ2 444 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 FPGTO14772 594 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 AREL1O15033 823 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 INSIG1O15503 277 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 SDC3O75056 442 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 C1SP09871 688 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 CDK4P11802 303 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 XPAP23025 273 aaPredicted RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 PIGHQ14442 188 aaPredicted RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 DHRS13Q6UX07 377 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 CYP4V2Q6ZWL3 525 aaPredicted RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 SLC25A45Q8N413 288 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 HCAR2Q8TDS4 363 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 ZCCHC14Q8WYQ9 949 aaKnown RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 IFT43Q96FT9 208 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 PDFQ9HBH1 243 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 CWC15Q9P013 229 aaKnown RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 LHX3Q9UBR4 397 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 IPO11Q9UI26 975 aaKnown RBP20.41■□□□□ 0.86
SYNE2-201ENST00000341472 ITM2BQ9Y287 266 aa20.41■□□□□ 0.86
SYNE2-201ENST00000341472 PALMO75781 387 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 TPM3P06753 285 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 DGKAP23743 735 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 RABIFP47224 123 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 SUOXP51687 545 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 DNAJC3Q13217 504 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 GRM3Q14832 879 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 SMAD1Q15797 465 aaKnown RBP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 AFMIDQ63HM1 303 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 KYAT3Q6YP21 454 aaKnown RBP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 PTAR1Q7Z6K3 402 aaPredicted RBP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 LZTR1Q8N653 840 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 EXOC2Q96KP1 924 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 KLF6Q99612 283 aaPredicted RBP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 THAP2Q9H0W7 228 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 SUV39H2Q9H5I1 410 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 ZWILCHQ9H900 591 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 GGT7Q9UJ14 662 aa20.4■□□□□ 0.86
SYNE2-201ENST00000341472 KMT2BQ9UMN6 2715 aaPredicted RBP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.4■□□□□ 0.86
SYNE2-201ENST00000341472 A0A087X0T9 212 aa20.39■□□□□ 0.85
SYNE2-201ENST00000341472 H3BRJ5 948 aa20.39■□□□□ 0.85
SYNE2-201ENST00000341472 DFFAO00273 331 aa20.39■□□□□ 0.85
SYNE2-201ENST00000341472 MMP20O60882 483 aa20.39■□□□□ 0.85
SYNE2-201ENST00000341472 FAM228BP0C875 321 aa20.39■□□□□ 0.85
SYNE2-201ENST00000341472 CKMT2P17540 419 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms