RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MATN3O15232 486 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TJP3O95049 919 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 FSBPO95073 299 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 POP4O95707 220 aaKnown RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PRNPP04156 253 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 HOXA6P31267 233 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 EIF3EP60228 445 aaKnown RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 COPS2P61201 443 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 SNX1Q13596 522 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PLK5Q496M5 336 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 CFAP58Q5T655 872 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TIGD7Q6NT04 549 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 NCEH1Q6PIU2 408 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 SRLQ86TD4 932 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 MS4A14Q96JA4 679 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 WDR24Q96S15 920 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 MYOCQ99972 504 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 SEMA3CQ99985 751 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 NOD2Q9HC29 1040 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 UBP1Q9NZI7 540 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PCDHGC4Q9Y5F7 938 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 ADAMTS9Q9P2N4 1935 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PLXNA2O75051 1894 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3DA0A087WVF3 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3IA0A087WXS9 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3LB9A6J9 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 APOC4-APOC2K7ER74 178 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF217O75362 1048 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 APOC2P02655 101 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3HP0C7X1 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 C5AR1P21730 350 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 CCNCP24863 283 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 RBL1P28749 1068 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 CREB5Q02930 508 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 PTPRRQ15256 657 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 DARS2Q6PI48 645 aaKnown RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 RGL4Q8IZJ4 473 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 BBS5Q8N3I7 341 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 BTBD1Q9H0C5 482 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 DUSP15Q9H1R2 295 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-202ENST00000340993 FBRSQ9HAH7 460 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 LRRK1Q38SD2 2015 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 OTOGLQ3ZCN5 2332 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 GOLGA6L9A6NEM1 432 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 C16orf96A6NNT2 1141 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 MEI4A8MW99 385 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 LILRB5O75023 590 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 SEMA4FO95754 770 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 FGGP02679 453 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 ITPKAP23677 461 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 RENBPP51606 427 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 ADPRHP54922 357 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 PPP2CBP62714 309 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 PPP2CAP67775 309 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 RAD51Q06609 339 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 RFTN1Q14699 578 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-202ENST00000340993 NOMO1Q15155 1222 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 PCSK7Q16549 785 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 AGBL4Q5VU57 503 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 LPCAT2Q7L5N7 544 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 ZSWIM9Q86XI8 627 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 SLC41A1Q8IVJ1 513 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 DCLK2Q8N568 766 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF599Q96NL3 588 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 SMIM14Q96QK8 99 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 PSKH2Q96QS6 385 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 WSB2Q9NYS7 404 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-202ENST00000340993 KLHL8Q9P2G9 620 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-202ENST00000340993 SLCO1B1Q9Y6L6 691 aa13.36□□□□□ -0.27
TUBD1-202ENST00000340993 PTPRZ1P23471 2315 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-202ENST00000340993 CCDC163A0A0D9SF12 145 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 NEMP1O14524 444 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF185O15231 689 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ALOX15BO15296 676 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 KCNN4O15554 427 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PCDH8O95206 1070 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 RBP3P10745 1247 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 XPAP23025 273 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PTPN3P26045 913 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 CD86P42081 329 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ABL2P42684 1182 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 NR2C2P49116 596 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms