RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 SYBUQ9NX95 663 aa11.88□□□□□ -0.51
C2orf88-201ENST00000340623 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
C2orf88-201ENST00000340623 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.88□□□□□ -0.51
C2orf88-201ENST00000340623 GCATO75600 419 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 CEBPBP17676 345 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 KRT4P19013 534 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 CHRM3P20309 590 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 MPP3Q13368 585 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 FASTKD3Q14CZ7 662 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 PREPLQ4J6C6 727 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ZNF470Q6ECI4 717 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 BEND5Q7L4P6 421 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 SHKBP1Q8TBC3 707 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 PGAP3Q96FM1 320 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 TRMT61BQ9BVS5 477 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 VN1R3Q9BXE9 311 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 IL22Q9GZX6 179 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 DNMT3BQ9UBC3 853 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ILVBLA1L0T0 632 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 H3BNC9 293 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 TMEM63AO94886 807 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 S100BP04271 92 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 HLA-DQB2P05538 268 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 VAV1P15498 845 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 PGAM1P18669 254 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 CHRNA4P43681 627 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 KBTBD12Q3ZCT8 623 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 RHBDF2Q6PJF5 856 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 KCNMB4Q86W47 210 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ATP6V1E2Q96A05 226 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 PPP1R36Q96LQ0 422 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 C1orf74Q96LT6 269 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ROPN1BQ9BZX4 212 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ROPN1Q9HAT0 212 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 MCM8Q9UJA3 840 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 MYO18AQ92614 2054 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 TMCC1O94876 653 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ADH5P11766 374 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 MZF1P28698 734 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 SERPINB9P50453 376 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 HTRA4P83105 476 aaPredicted RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 GALNT2Q10471 571 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 PDAP1Q13442 181 aaKnown RBP11.87□□□□□ -0.51
C2orf88-201ENST00000340623 C6orf163Q5TEZ5 329 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 NXNQ6DKJ4 435 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 HIPK4Q8NE63 616 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 ITFG1Q8TB96 612 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 IRF7Q92985 503 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 LINC00597Q9H2U6 94 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 RAI2Q9Y5P3 530 aa11.87□□□□□ -0.51
C2orf88-201ENST00000340623 MGAMO43451 1857 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 DCLK1O15075 740 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 APODP05090 189 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 CREB1P16220 341 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 GRIA1P42261 906 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ZNF572Q7Z3I7 529 aaPredicted RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SPATS2Q86XZ4 545 aaKnown RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 FLCNQ8NFG4 579 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 STMN2Q93045 179 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SLC25A51Q9H1U9 297 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 NPHS2Q9NP85 383 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 TMEM248Q9NWD8 314 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 IL1RAPL1Q9NZN1 696 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ANGPTL3Q9Y5C1 460 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 TCRBV7S3A2A0A539 114 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 GLP2RO95838 553 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 EPHX1P07099 455 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SEC13P55735 322 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SEMG2Q02383 582 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 CNGA3Q16281 694 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 AGBL2Q5U5Z8 902 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SETD3Q86TU7 594 aaPredicted RBP11.86□□□□□ -0.51
C2orf88-201ENST00000340623 CCNYL1Q8N7R7 359 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 SMARCD2Q92925 531 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 TTLL2Q9BWV7 592 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 C1orf232A0A0U1RR37 186 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 MAGEB16A2A368 324 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 BAG2O95816 211 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ACADMP11310 421 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ITGALP20701 1170 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 MTHFRP42898 656 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 ERVK-21P61565 698 aa11.86□□□□□ -0.51
C2orf88-201ENST00000340623 CCDC15Q0P6D6 951 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms