RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ANK1P16157 1881 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PIRO00625 290 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 VILLO15195 856 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 UBDO15205 165 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TREHO43280 583 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 STAMBPO95630 424 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 CCDC166P0CW27 439 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PCSK6P29122 969 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 ARL1P40616 181 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-201ENST00000340437 BEX3Q00994 111 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 FAM83EQ2M2I3 478 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 B3GNT6Q6ZMB0 384 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 MFSD6LQ8IWD5 586 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 BTBD9Q96Q07 612 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TBL1YQ9BQ87 522 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 MROH8Q9H579 483 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 ZBTB26Q9HCK0 441 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TNFRSF12AQ9NP84 129 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 CRTAC1Q9NQ79 661 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TSR3Q9UJK0 312 aaKnown RBP14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PTGDR2Q9Y5Y4 395 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 FOXD2O60548 495 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-201ENST00000340437 MAPK10P53779 464 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 ZBTB6Q15916 424 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TFAP2DQ7Z6R9 452 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 TEKT5Q96M29 485 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 GAD1Q99259 594 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 SMOQ99835 787 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 DCUN1D5Q9BTE7 237 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 IPPQ9Y573 584 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 SMIM31A0A1B0GVY4 71 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 KLHL33A6NCF5 533 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 XPOTO43592 962 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 MYL3P08590 195 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 SMIM10L2AP0DMW4 78 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 SMIM10L2BP0DMW5 78 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 GRIA3P42263 894 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 GALK1P51570 392 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PPIDQ08752 370 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 CLEC14AQ86T13 490 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PPHLN1Q8NEY8 458 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 GPRC5AQ8NFJ5 357 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 GPR22Q99680 433 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 ALG9Q9H6U8 611 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 FBXW11Q9UKB1 542 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF638Q14966 1978 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 TCAF2A6NFQ2 919 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 OR51F1A6NGY5 319 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PSMD12O00232 456 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 STAU1O95793 577 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 MT-ND1P03886 318 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 CSE1LP55060 971 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 HERC6Q8IVU3 1022 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 SCAMP5Q8TAC9 235 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 EMID1Q96A84 441 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PABPC5Q96DU9 382 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 SLC29A1Q99808 456 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 WDR6Q9NNW5 1121 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 RIMS3Q9UJD0 308 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 MMP3P08254 477 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 DARSP14868 501 aaKnown RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PRDX6P30041 224 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 RGS2P41220 211 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 DAOAP59103 153 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF410Q86VK4 478 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 DDIASQ8IXT1 998 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 LINC01465Q8N7H1 131 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 HDAC11Q96DB2 347 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PAAF1Q9BRP4 392 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 NDFIP2Q9NV92 336 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 GALNT8Q9NY28 637 aa14.54□□□□□ -0.08
CPSF7-201ENST00000340437 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-201ENST00000340437 PDLIM1O00151 329 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 CLIC3O95833 236 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 C1QTNF8P60827 252 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 XIAPP98170 497 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 MGAT5BQ3V5L5 792 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 PKN3Q6P5Z2 889 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 ZBTB49Q6ZSB9 765 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 TSPAN14Q8NG11 270 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 OR52K2Q8NGK3 314 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 KLHL5Q96PQ7 755 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 MRPL46Q9H2W6 279 aaKnown RBP14.53□□□□□ -0.08
CPSF7-201ENST00000340437 FBXO5Q9UKT4 447 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 C7orf72A4D263 438 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF487B1APH4 448 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 NR5A2O00482 541 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 SDHDO14521 159 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 MRASO14807 208 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 CASQ2O14958 399 aaPredicted RBP14.53□□□□□ -0.08
CPSF7-201ENST00000340437 APOA4P06727 396 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 PIRTP0C851 137 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 SCNN1BP51168 640 aa14.53□□□□□ -0.08
CPSF7-201ENST00000340437 SLC7A2P52569 658 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms