RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 H3BUI4 141 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 BTN3A3O00478 584 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CLN5O75503 358 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 DHFRP00374 187 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ADRA1DP25100 572 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HOXC8P31273 242 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 GARSP41250 739 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 NKX2-5P52952 324 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 UBE2IP63279 158 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PPARDQ03181 441 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PDK1Q15118 436 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SWI5Q1ZZU3 235 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM67Q5HYA8 995 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 INTS11Q5TA45 600 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ATF7IP2Q5U623 682 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 IZUMO3Q5VZ72 239 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PDPK2PQ6A1A2 396 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CRTC3Q6UUV7 619 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM26Q6ZUK4 368 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CCDC36Q8IYA8 594 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SNAPC3Q92966 411 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF512BQ96KM6 892 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HEXIM2Q96MH2 286 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 RDH12Q96NR8 316 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SLC22A4Q9H015 551 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 KCNQ5Q9NR82 932 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HPF1Q9NWY4 346 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ACTR10Q9NZ32 417 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 MLXQ9UH92 298 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SHOC2Q9UQ13 582 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CNTNAP1P78357 1384 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ARHGAP5Q13017 1502 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 FAM155BO75949 473 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CCNB2O95067 398 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CYP2A7P20853 494 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ZP3P21754 424 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 WARSP23381 471 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 UQCRC1P31930 480 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CAPZA2P47755 286 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ATP12AP54707 1039 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 STXBP5Q5T5C0 1151 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 UBAP2Q5T6F2 1119 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SLC6A19Q695T7 634 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 RHPN2Q8IUC4 686 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 UTP15Q8TED0 518 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 POMGNT1Q8WZA1 660 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 RIT2Q99578 217 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ADI1Q9BV57 179 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 LHX5Q9H2C1 402 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 WWOXQ9NZC7 414 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TRPM5Q9NZQ8 1165 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 DPP7Q9UHL4 492 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 NAGPAQ9UK23 515 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 COPG1Q9Y678 874 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 USP31Q70CQ4 1352 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 KRT87PA6NCN2 255 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 FSCN2O14926 492 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PPM1DO15297 605 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HTRA2O43464 458 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HTR3BO95264 441 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SLC5A1P13866 664 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 POU2F1P14859 743 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ALAS2P22557 587 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ITGA6P23229 1130 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SOX6P35712 828 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 NUP62P37198 522 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 FSTL1Q12841 308 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CDH17Q12864 832 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ART3Q13508 389 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 GRAPQ13588 217 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 IKBKEQ14164 716 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 AMIGO1Q86WK6 493 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ARID3BQ8IVW6 561 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 LGI2Q8N0V4 545 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PGAM4Q8N0Y7 254 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 BANPQ8N9N5 519 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HIPK4Q8NE63 616 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 NKD2Q969F2 451 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 CCDC124Q96CT7 223 aaKnown RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 VCPIP1Q96JH7 1222 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM68Q96MH6 324 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TBCDQ9BTW9 1192 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ZYG11BQ9C0D3 744 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SH3GLB2Q9NR46 395 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TRHDEQ9UKU6 1024 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 USTQ9Y2C2 406 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 E2F8A0AVK6 867 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 TYROBPO43914 113 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 SEC14L2O76054 403 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 RASGRP1O95267 797 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 INHBAP08476 426 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 MBL2P11226 248 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-201ENST00000338963 BMP2P12643 396 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 HLA-DMAP28067 261 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 NDST1P52848 882 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 PRMT2P55345 433 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ACTR2P61160 394 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 GABREP78334 506 aa4.19□□□□□ -1.74
NEDD4-201ENST00000338963 ALCAMQ13740 583 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms