RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 DPPA5A6NC42 116 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 PIK3R2O00459 728 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 AP1G1O43747 822 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 TRIM13O60858 407 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 CXCL14O95715 111 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 LCP1P13796 627 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 GLDCP23378 1020 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 TKTP29401 623 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 HOXC13P31276 330 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 SLC11A1P49279 550 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 KPNA2P52292 529 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 MTTPP55157 894 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 LILRA4P59901 499 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 SATB1Q01826 763 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ANO4Q32M45 955 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ANKRD20A4Q4UJ75 823 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 TRIM68Q6AZZ1 485 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ZFP1Q6P2D0 407 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 CASC4Q6P4E1 433 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ZYG11AQ6WRX3 759 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 CLEC20AQ6ZU45 233 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 SDCCAG8Q86SQ7 713 aaPredicted RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 DDX53Q86TM3 631 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 OSTM1Q86WC4 334 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 FAM131BQ86XD5 332 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ZNF280BQ86YH2 543 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 SIX6OS1Q8N1H7 587 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 DCLK2Q8N568 766 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 CASP10Q92851 521 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 FATE1Q969F0 183 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 LGMNQ99538 433 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 EPAS1Q99814 870 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 GORASP1Q9BQQ3 440 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 EBF4Q9BQW3 602 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 THTPAQ9BU02 230 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 KIFC1Q9BW19 673 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 VN1R3Q9BXE9 311 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 NXF3Q9H4D5 531 aaKnown RBP10.93□□□□□ -0.66
RTN3-201ENST00000338850 RHOJQ9H4E5 214 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 EPB41L1Q9H4G0 881 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ZNF385DQ9H6B1 395 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 ARHGAP26Q9UNA1 814 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 TBC1D30Q9Y2I9 924 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 RAP2CQ9Y3L5 183 aa10.93□□□□□ -0.66
RTN3-201ENST00000338850 SHROOM3Q8TF72 1996 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ZNF318Q5VUA4 2279 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PLXNA3P51805 1871 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 G3V2L1 256 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 M0QYT0 321 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 SPTLC1O15269 473 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ITM2AO43736 263 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 TADA2AO75478 443 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 DDHD2O94830 711 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CAPNS1P04632 268 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CTSAP10619 480 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PTPN1P18031 435 aaKnown RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 ERCC2P18074 760 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CA8P35219 290 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CXCR3P49682 368 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 TKTL1P51854 596 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ATXN1P54253 815 aaKnown RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 SESN2P58004 480 aaPredicted RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 TPI1P60174 286 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ZXDAP98168 799 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 NRG1Q02297 640 aaPredicted RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 KDSRQ06136 332 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CDH17Q12864 832 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CDC16Q13042 620 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PRKAA1Q13131 559 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 MPP3Q13368 585 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PRPSAP1Q14558 356 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 IRAK1BP1Q5VVH5 260 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 TMEM154Q6P9G4 183 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 DCLRE1AQ6PJP8 1040 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 C16orf89Q6UX73 402 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PAQR9Q6ZVX9 377 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 LRRC49Q8IUZ0 686 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 MFN1Q8IWA4 741 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 LZTR1Q8N653 840 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 URGCPQ8TCY9 931 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 AUTS2Q8WXX7 1259 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 DLG3Q92796 817 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 ZNF669Q96BR6 464 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms