RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SPON2Q9BUD6 331 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ATXN3LQ9H3M9 355 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 SLC17A7Q9P2U7 560 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 PSAT1Q9Y617 370 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 MIA3Q5JRA6 1907 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ALDOAP04075 364 aaKnown RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 CKMP06732 381 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 POU2F2P09086 479 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SERPINB4P48594 390 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SGSHP51688 502 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
HPS1-202ENST00000338546 PCSK7Q16549 785 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 RNF219Q5W0B1 726 aaPredicted RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 GALNT7Q86SF2 657 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 C7orf61Q8IZ16 206 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 OR52K2Q8NGK3 314 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 IFT43Q96FT9 208 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 FAM111AQ96PZ2 611 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 RHOJQ9H4E5 214 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 MANSC1Q9H8J5 431 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 IARS2Q9NSE4 1012 aaKnown RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 DPP7Q9UHL4 492 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 ARHGAP26Q9UNA1 814 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SH3BP1Q9Y3L3 701 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 MROH6A6NGR9 719 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 H0Y626 953 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 TSPAN3O60637 253 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 EDF1O60869 148 aaKnown RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 TBL1XO60907 577 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 KIAA0754O94854 1291 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 HNRNPA1P09651 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
HPS1-202ENST00000338546 ATXN1LP0C7T5 689 aaKnown RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 CR2P20023 1033 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 MPPE1Q53F39 396 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SIRPB2Q5JXA9 342 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 TSTD2Q5T7W7 516 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 RNF43Q68DV7 783 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SPATA21Q7Z572 469 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 MAB21L3Q8N8X9 362 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 SAMD11Q96NU1 681 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 AGAP2Q99490 1192 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
HPS1-202ENST00000338546 PCMTD2Q9NV79 361 aa16.43■□□□□ 0.22
HPS1-202ENST00000338546 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 HIDE1A8MVS5 230 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 TPP1O14773 563 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 MUSKO15146 869 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 INSIG1O15503 277 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 NDST3O95803 873 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 PTPN2P17706 415 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 TYK2P29597 1187 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 ZXDBP98169 803 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 CYP4F8P98187 520 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 THOC5Q13769 683 aaKnown RBP16.42■□□□□ 0.22
HPS1-202ENST00000338546 IHHQ14623 411 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 FYB2Q5VWT5 728 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 PLPP4Q5VZY2 271 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 FSTL4Q6MZW2 842 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 ESRP1Q6NXG1 681 aaKnown RBP16.42■□□□□ 0.22
HPS1-202ENST00000338546 METTL3Q86U44 580 aaKnown RBP16.42■□□□□ 0.22
HPS1-202ENST00000338546 SLC25A41Q8N5S1 370 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 ZNF778Q96MU6 729 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 NUDCD1Q96RS6 583 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 GPR22Q99680 433 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 SLC13A1Q9BZW2 595 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 PHTF1Q9UMS5 762 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 ARL2BPQ9Y2Y0 163 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
HPS1-202ENST00000338546 E2F8A0AVK6 867 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 SLC7A4O43246 635 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 ZMPSTE24O75844 475 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 VAPBO95292 243 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 CHRNA4P43681 627 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 PDE1CQ14123 709 aaPredicted RBP16.41■□□□□ 0.22
HPS1-202ENST00000338546 CYTH1Q15438 398 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 CNGA3Q16281 694 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 CDHR3Q6ZTQ4 885 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 CARNMT1Q8N4J0 409 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 DCLK2Q8N568 766 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 DCAF4L2Q8NA75 395 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 ZNF398Q8TD17 642 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 PTPRN2Q92932 1015 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 ACDQ96AP0 544 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 VPS39Q96JC1 886 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 TRIB3Q96RU7 358 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 LBHD1Q9BQE6 289 aaPredicted RBP16.41■□□□□ 0.22
HPS1-202ENST00000338546 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 CFAP97Q9P2B7 532 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 SLC17A6Q9P2U8 582 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
HPS1-202ENST00000338546 ANKRD6Q9Y2G4 727 aa16.41■□□□□ 0.22
HPS1-202ENST00000338546 A0A1W2PRU2 124 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms