RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TMEM161AQ9NX61 479 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 GNPTGQ9UJJ9 305 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 CNOT6Q9ULM6 557 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 A0A0A0MRY4 1105 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 RHOBTB1O94844 696 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 HGFP14210 728 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CD97P48960 835 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SNX17Q15036 470 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TIGD2Q4W5G0 525 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 MILR1Q7Z6M3 343 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 GALNT5Q7Z7M9 940 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SPATA13Q96N96 652 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CPXM1Q96SM3 734 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SP110Q9HB58 689 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 RASSF1Q9NS23 344 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 IFT80Q9P2H3 777 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TMEM233B4DJY2 109 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 M0QZ92 97 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 PLSCR1O15162 318 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SYNCRIPO60506 623 aaKnown RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 METTL18O95568 372 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 RBP1P09455 135 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TXNP10599 105 aaKnown RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 NCAM1P13591 858 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TNFSF9P41273 254 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CCR10P46092 362 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TNK2Q07912 1038 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 DENND5AQ6IQ26 1287 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CLIP4Q8N3C7 705 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 GLT1D1Q96MS3 346 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 TMEM245Q9H330 911 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 A8MV72 311 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CYP3A4P08684 503 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 FGFR1P11362 822 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SLC18A2Q05940 514 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 MOGQ16653 247 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 UGCGQ16739 394 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CLEC6AQ6EIG7 209 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 BBS5Q8N3I7 341 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 OLFM1Q99784 485 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 FEM1AQ9BSK4 669 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 PRDM12Q9H4Q4 367 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 KLHL20Q9Y2M5 609 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 CRYL1Q9Y2S2 319 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 WBP11Q9Y2W2 641 aaKnown RBP13.36□□□□□ -0.27
COL2A1-201ENST00000337299 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 PNMA8CA0A1B0GUJ8 204 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 MYBPC1Q00872 1141 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 PDZK1Q5T2W1 519 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 PRMT9Q6P2P2 845 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 IL31RAQ8NI17 732 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 LPAR1Q92633 364 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
COL2A1-201ENST00000337299 KRT87PA6NCN2 255 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 KATNA1O75449 491 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NDUFS3O75489 264 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FTH1P02794 183 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 MTHFD1P11586 935 aaKnown RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF24P17028 368 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ITGB5P18084 799 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 HDCP19113 662 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 TCEA1P23193 301 aaKnown RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NPY2RP49146 381 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NDST2P52849 883 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 BCAT1P54687 386 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 TAB1Q15750 504 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FBXO48Q5FWF7 155 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SVOPQ8N4V2 548 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 PLD5Q8N7P1 536 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 GPR88Q9GZN0 384 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 TJP2Q9UDY2 1190 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 A0A0J9YYE9 177 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 EFCAB10A6NFE3 127 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 AURKAO14965 403 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 CABYRO75952 493 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 CST1P01037 141 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms