RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 EPAS1Q99814 870 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 POLR3BQ9NW08 1133 aaPredicted RBP13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 KIAA1522Q9P206 1035 aaPredicted RBP13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 KLHL14Q9P2G3 628 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 ZNF212Q9UDV6 495 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
TUBB2A-201ENST00000333628 LRRD1A4D1F6 860 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 C3orf70A6NLC5 250 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 TIMM44O43615 452 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SP9P0CG40 484 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 RHOQP17081 205 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 EPHB2P29323 1055 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 OR1E1P30953 314 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 KIR2DL1P43626 348 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 HCAR3P49019 387 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 VPS41P49754 854 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SEC13P55735 322 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SATB1Q01826 763 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 LLGL1Q15334 1064 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 DPYSL2Q16555 572 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 C2orf27AQ580R0 203 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ADIPOR2Q86V24 386 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 VSIG1Q86XK7 387 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 OR52K2Q8NGK3 314 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ALKBH8Q96BT7 664 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 RETREG1Q9H6L5 497 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 INTS6Q9UL03 887 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 HCN2Q9UL51 889 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 MYO15AQ9UKN7 3530 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 E7ESA3 106 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 EEF2KO00418 725 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 KRT10P13645 584 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PECAM1P16284 738 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 GOT1P17174 413 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 MZF1P28698 734 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 STIP1P31948 543 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 HTR7P34969 479 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 GJC1P36383 396 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PLK1P53350 603 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 OXCT1P55809 520 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ARL4CP56559 192 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 BNIP1Q12981 228 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 HIF1AQ16665 826 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 KLHL38Q2WGJ6 581 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 KAZNQ674X7 775 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 CCDC91Q7Z6B0 441 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 APCDD1Q8J025 514 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SPEM1Q8N4L4 309 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ATP11CQ8NB49 1132 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 DENND1AQ8TEH3 1009 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 WFIKKN2Q8TEU8 576 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 USP33Q8TEY7 942 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ALG14Q96F25 216 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 SMC6Q96SB8 1091 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 FEM1AQ9BSK4 669 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PRMT8Q9NR22 394 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 FGFR1OP2Q9NVK5 253 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 TMEM248Q9NWD8 314 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 ELOVL2Q9NXB9 296 aa13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 PSMC3IPQ9P2W1 217 aaPredicted RBP13.66□□□□□ -0.22
TUBB2A-201ENST00000333628 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 SGK1O00141 431 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 SPAG6O75602 509 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 ZWINTO95229 277 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 ASMTLO95671 621 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 KDELR1P24390 212 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 TIE1P35590 1138 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CSKP41240 450 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CXCL12P48061 93 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 ZNF135P52742 658 aaPredicted RBP13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 GEMIN4P57678 1058 aaKnown RBP13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 TPI1P60174 286 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 MRPS21P82921 87 aaKnown RBP13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 FUT11Q495W5 492 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 PITRM1Q5JRX3 1037 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 MBLAC2Q68D91 279 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 RFX8Q6ZV50 586 aa13.65□□□□□ -0.22
TUBB2A-201ENST00000333628 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 299.8 ms