RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 HOXC11O43248 304 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 MAN1A2O60476 641 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 NPHS1O60500 1241 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 MRPS14O60783 128 aaKnown RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 KRT8P05787 483 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 IL1R2P27930 398 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RPS9P46781 194 aaKnown RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 ATP5OP48047 213 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 POLD2P49005 469 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PLA2G16P53816 162 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 YWHAEP62258 255 aaKnown RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 ECT2LQ008S8 904 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RIPPLY1Q0D2K3 151 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 BFSP2Q13515 415 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 NFIXQ14938 502 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 NFE2Q16621 373 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 GRAMD2AQ8IUY3 354 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RHOXF1Q8NHV9 184 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 EGLN2Q96KS0 407 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 CSF3RQ99062 836 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RNPEPQ9H4A4 650 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ACTR3BQ9P1U1 418 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ABCD2Q9UBJ2 740 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ANAPC2Q9UJX6 822 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PACSIN3Q9UKS6 424 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ST14Q9Y5Y6 855 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 DHRS12A0PJE2 317 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PRORSD1PA6NEY8 169 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 B8ZZF3 427 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SLC16A4O15374 487 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 UPK1BO75841 260 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SRP72O76094 671 aaKnown RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 SUPT7LO94864 414 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 HPRP00739 348 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 APRTP07741 180 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 CFHP08603 1231 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TRAPPC2P0DI81 140 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TRAPPC2BP0DI82 140 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PRKCAP17252 672 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 MZF1P28698 734 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 GRM5P41594 1212 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 P2RX3P56373 397 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TNK2Q07912 1038 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 FOXM1Q08050 763 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 GRM1Q13255 1194 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 GRIK5Q16478 980 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 DUSP7Q16829 419 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SPANXN3Q5MJ09 141 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PERM1Q5SV97 790 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ZNF280DQ6N043 979 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SLC51BQ86UW2 128 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SLC22A16Q86VW1 577 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TBC1D21Q8IYX1 336 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ARFGAP1Q8N6T3 406 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 SHCBP1Q8NEM2 672 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 ZSCAN18Q8TBC5 510 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RNF157Q96PX1 679 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 PI4K2AQ9BTU6 479 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 GATA5Q9BWX5 397 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 LHPPQ9H008 270 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 RNF38Q9H0F5 515 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TM9SF3Q9HD45 589 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 CROCCQ5TZA2 2017 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 STX16-NPEPL1H3BU86 382 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 TEX28O15482 410 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 KCNN4O15554 427 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CHMP2AO43633 222 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 TIPRLO75663 272 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CCNE2O96020 404 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 JUNP05412 331 aaKnown RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 TCN1P20061 433 aaPredicted RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 FGFR3P22607 806 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 NR2C2P49116 596 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 PRIM2P49643 509 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 IST1P53990 364 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 IFITM3Q01628 133 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 FCHO2Q0JRZ9 810 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 ACOX1Q15067 660 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 STILQ15468 1287 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CTF1Q16619 201 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 COQ5Q5HYK3 327 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 REP15Q6BDI9 236 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 TAF2Q6P1X5 1199 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CCDC81Q6ZN84 652 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 SLC16A12Q6ZSM3 486 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 ADAMTSL2Q86TH1 951 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 SLCO6A1Q86UG4 719 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CDR2LQ86X02 465 aaPredicted RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 SVOPQ8N4V2 548 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 CANT1Q8WVQ1 401 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 AURKBQ96GD4 344 aaPredicted RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 CEP170P1Q96L14 293 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms