RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 KLK6Q92876 244 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 FZD3Q9NPG1 666 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 DKK3Q9UBP4 350 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
GTF3C6-201ENST00000329970 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 A0A1B0GTH6 734 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 RASA4BC9J798 803 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 KRIT1O00522 736 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 SPINT1O43278 529 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 RASA4O43374 803 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 BUB1O43683 1085 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 IGSF6O95976 241 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 PAK4O96013 591 aaPredicted RBP13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 GIMD1P0DJR0 217 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF135P52742 658 aaPredicted RBP13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 NDST2P52849 883 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 E2F1Q01094 437 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 OGDHQ02218 1023 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 MAMLD1Q13495 774 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 ITPR1Q14643 2758 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 GRM3Q14832 879 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 Q6ZSR6 202 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 TMC6Q7Z403 805 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 PSTKQ8IV42 348 aaKnown RBP13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 MYOCQ99972 504 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 NRSN2Q9GZP1 204 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
GTF3C6-201ENST00000329970 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 TSPAN11A1L157 253 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 POM121BA6NF01 834 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 NEMP2A6NFY4 417 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 LRRC53A6NM62 1247 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 TRIM38O00635 465 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 FPGTO14772 594 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 SCAMP1O15126 338 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 RAD51BO15315 384 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 CREB3O43889 395 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 SDC3O75056 442 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 CSF2P04141 144 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 UGT2B4P06133 528 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 ALPPL2P10696 532 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 JUPP14923 745 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 NME1P15531 152 aaKnown RBP13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 CLDN2P57739 230 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 PFN3P60673 137 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 SGCGQ13326 291 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 FZD2Q14332 565 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 HES3Q5TGS1 186 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 PTAR1Q7Z6K3 402 aaPredicted RBP13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 PARGQ86W56 976 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 CENPTQ96BT3 561 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 NXPE2Q96DL1 559 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 HMCESQ96FZ2 354 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 TBATAQ96M53 351 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 KLHL32Q96NJ5 620 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 NCAPGQ9BPX3 1015 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 KLC2Q9H0B6 622 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 CSNK1G3Q9Y6M4 447 aa13.76□□□□□ -0.21
GTF3C6-201ENST00000329970 RP1P56715 2156 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 FAM149AA5PLN7 773 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 TMEM191CA6NGB0 347 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 IGLON5A6NGN9 336 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 GP1BAP07359 652 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 CKMT1AP12532 417 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 GKP32189 559 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 CSNK1DP48730 415 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF165P49910 485 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 TPI1P60174 286 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 RHOAP61586 193 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 CYP4F3Q08477 520 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 RTP5Q14D33 572 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 ASIC2Q16515 512 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 CCDC157Q569K6 752 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 ERMARDQ5T6L9 678 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF354CQ86Y25 554 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms