RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 TWF1Q12792 350 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 DNAJB7Q7Z6W7 309 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 TRIM42Q8IWZ5 723 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 GPR22Q99680 433 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 KLF16Q9BXK1 252 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 MRM3Q9HC36 420 aaKnown RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 FBXO6Q9NRD1 293 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 AGO1Q9UL18 857 aaKnown RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 KCTD3Q9Y597 815 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 ZBBXA8MT70 800 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 CCL22O00626 93 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 PHGDHO43175 533 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 TIMM44O43615 452 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 UNC5CO95185 931 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 CBX6O95503 412 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ATXN1LP0C7T5 689 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 TARSP26639 723 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 SERPINB3P29508 390 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ELF1P32519 619 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 AVPR1AP37288 418 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 SLC1A2P43004 574 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 GNA12Q03113 381 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 RAB33AQ14088 237 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 VEPH1Q14D04 833 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 CTC1Q2NKJ3 1217 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ZNF789Q5FWF6 425 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ARID3BQ8IVW6 561 aaPredicted RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 PTCD2Q8WV60 388 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ZNF334Q9HCZ1 680 aaPredicted RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 MRPL17Q9NRX2 175 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 SMPD4Q9NXE4 827 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 COPG2Q9UBF2 871 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 STK39Q9UEW8 545 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 HAO1Q9UJM8 370 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 PCDHB12Q9Y5F1 795 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 LOC285095A0A1B0GVY8 99 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 G3V2L1 256 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 PRRG1O14668 218 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 HAUS5O94927 633 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 MPOP05164 745 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 HNRNPH1P31943 449 aaKnown RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 C1QTNF8P60827 252 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ZXDBP98169 803 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 ZNF460Q14592 562 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 CLNKQ7Z7G1 428 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 CEP97Q8IW35 865 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 TMEM151AQ8N4L1 468 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 OR13J1Q8NGT2 312 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
PGBD2-201ENST00000329291 DNAJC6O75061 913 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 SIN3BO75182 1162 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 CPA3P15088 417 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 RGRP47804 291 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.16
PGBD2-201ENST00000329291 TSTD2Q5T7W7 516 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 TMCO4Q5TGY1 634 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 ZNF470Q6ECI4 717 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 TTC7BQ86TV6 843 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 KLHL29Q96CT2 875 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 MOCOSQ96EN8 888 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 TRMT2BQ96GJ1 504 aaKnown RBP16.02■□□□□ 0.16
PGBD2-201ENST00000329291 ZFRQ96KR1 1074 aaKnown RBP16.02■□□□□ 0.16
PGBD2-201ENST00000329291 TMEM237Q96Q45 408 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 ARHGEF3Q9NR81 526 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.16
PGBD2-201ENST00000329291 THAP1Q9NVV9 213 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 ZFP69BQ9UJL9 534 aa16.02■□□□□ 0.16
PGBD2-201ENST00000329291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 TEX28O15482 410 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 SBK3P0C264 359 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 SLC35E2BP0CK96 405 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 NQO1P15559 274 aaKnown RBP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 ARSDP51689 593 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 CDH4P55283 916 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 CREMQ03060 361 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 PPIGQ13427 754 aaKnown RBP eCLIP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 PTPRCAPQ14761 206 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 IL31Q6EBC2 164 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 KIAA0930Q6ICG6 404 aaPredicted RBP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 NEPROQ6NW34 567 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 CYB5D1Q6P9G0 228 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 NAPRTQ6XQN6 538 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 ALYREFQ86V81 257 aaKnown RBP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 SPATA6LQ8N4H0 392 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 C2CD4AQ8NCU7 369 aaPredicted RBP16.01■□□□□ 0.15
PGBD2-201ENST00000329291 OR6Y1Q8NGX8 325 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 SKA1Q96BD8 255 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 PLD4Q96BZ4 506 aa16.01■□□□□ 0.15
PGBD2-201ENST00000329291 MAGEH1Q9H213 219 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms