RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ZNF248Q8NDW4 579 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 CXorf40AQ8TE69 158 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 ZNF578Q96N58 590 aaPredicted RBP23.67■■□□□ 1.38
TMEM54-201ENST00000329151 KLHL32Q96NJ5 620 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 BBC3Q96PG8 261 aaPredicted RBP23.67■■□□□ 1.38
TMEM54-201ENST00000329151 NCAPGQ9BPX3 1015 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 C1QTNF2Q9BXJ5 285 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 GANQ9H2C0 597 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 SPASTQ9UBP0 616 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 PCDHB1Q9Y5F3 818 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 ACTL7AQ9Y615 435 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 CSNK1G3Q9Y6M4 447 aa23.67■■□□□ 1.38
TMEM54-201ENST00000329151 SMG1Q96Q15 3661 aaKnown RBP23.66■■□□□ 1.38
TMEM54-201ENST00000329151 GCN1Q92616 2671 aaKnown RBP23.66■■□□□ 1.38
TMEM54-201ENST00000329151 C2CD4BA6NLJ0 364 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 RAD51BO15315 384 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 LRIG2O94898 1065 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 GPD1P21695 349 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 GABREP78334 506 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 FMO1Q01740 532 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 FGL2Q14314 439 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 SCYL2Q6P3W7 929 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 GDPD4Q6W3E5 623 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 SLFN11Q7Z7L1 901 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 NEK11Q8NG66 645 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 JOSD2Q8TAC2 188 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 ASB12Q8WXK4 309 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 SLC13A1Q9BZW2 595 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 NDFIP2Q9NV92 336 aa23.66■■□□□ 1.38
TMEM54-201ENST00000329151 MPOP05164 745 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 MYF5P13349 255 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 EPHB2P29323 1055 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 ABL2P42684 1182 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 RHOAP61586 193 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 C19orf57Q0VDD7 668 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 KRT31Q15323 416 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 CDKN3Q16667 212 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 DEFB133Q30KQ1 61 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 MANEALQ5VSG8 457 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 GPR155Q7Z3F1 870 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 VPS36Q86VN1 386 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 NLRP14Q86W24 1093 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 TPCN2Q8NHX9 752 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 ENOX1Q8TC92 643 aaKnown RBP23.65■■□□□ 1.38
TMEM54-201ENST00000329151 CASKIN2Q8WXE0 1202 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 PRORYQ9H606 182 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 APOBEC3BQ9UH17 382 aaKnown RBP23.65■■□□□ 1.38
TMEM54-201ENST00000329151 DOLKQ9UPQ8 538 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 ITM2BQ9Y287 266 aa23.65■■□□□ 1.38
TMEM54-201ENST00000329151 FAM72CH0Y354 149 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 KDELR3O43731 214 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 TM7SF2O76062 418 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 KLK7P49862 253 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 CXADRP78310 365 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 NR0B2Q15466 257 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 CFAP58Q5T655 872 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 ATXN7L2Q5T6C5 722 aaPredicted RBP23.64■■□□□ 1.37
TMEM54-201ENST00000329151 FAM72AQ5TYM5 149 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 FAM72DQ6L9T8 149 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 DNAJC24Q6P3W2 148 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 EFL1Q7Z2Z2 1120 aaKnown RBP23.64■■□□□ 1.37
TMEM54-201ENST00000329151 FAM72BQ86X60 149 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 CCDC185Q8N715 623 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 PAF1Q8N7H5 531 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 SLC39A7Q92504 469 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 NTAN1Q96AB6 310 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 NAF1Q96HR8 494 aaKnown RBP23.64■■□□□ 1.37
TMEM54-201ENST00000329151 EPAS1Q99814 870 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 CATSPERBQ9H7T0 1116 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 GPR27Q9NS67 375 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 SALL4Q9UJQ4 1053 aa23.64■■□□□ 1.37
TMEM54-201ENST00000329151 TMCC1O94876 653 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 GJB6O95452 261 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 ANXA6P08133 673 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 GIMD1P0DJR0 217 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 RBMS1P29558 406 aaKnown RBP23.63■■□□□ 1.37
TMEM54-201ENST00000329151 HDAC4P56524 1084 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 RAB6CQ53S08 254 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 FAXCQ5TGI0 409 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 CDCP2Q5VXM1 449 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 RAB6CQ9H0N0 254 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 SYNDIG1Q9H7V2 258 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 POLR1BQ9H9Y6 1135 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 THSD1Q9NS62 852 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 DONSONQ9NYP3 566 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 GGT7Q9UJ14 662 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 RAI2Q9Y5P3 530 aa23.63■■□□□ 1.37
TMEM54-201ENST00000329151 BPTFQ12830 3046 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 TEX51A0A1B0GUA7 166 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 TK2O00142 265 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 TPP1O14773 563 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 CREB3O43889 395 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 CD160O95971 181 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 CHRNB2P17787 502 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 RFC1P35251 1148 aaPredicted RBP23.62■■□□□ 1.37
TMEM54-201ENST00000329151 LSSP48449 732 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 UCNP55089 124 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 JAM2P57087 298 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 YPEL5P62699 121 aa23.62■■□□□ 1.37
TMEM54-201ENST00000329151 PRRT3Q5FWE3 981 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms