RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 BBS9Q3SYG4 887 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 SLC44A4Q53GD3 710 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 KIAA0907Q7Z7F0 614 aaPredicted RBP18.27■□□□□ 0.51
SYNE4-201ENST00000324444 PALM2Q8IXS6 379 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 ZBED8Q8IZ13 594 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 GOLGA6L1Q8N7Z2 621 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 DNAAF3Q8N9W5 541 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 ISG20Q96AZ6 181 aaKnown RBP18.27■□□□□ 0.51
SYNE4-201ENST00000324444 SHDQ96IW2 340 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 LMLNQ96KR4 655 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 FOXQ1Q9C009 403 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 CDC42EP4Q9H3Q1 356 aaKnown RBP18.27■□□□□ 0.51
SYNE4-201ENST00000324444 PPCSQ9HAB8 311 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 SIT1Q9Y3P8 196 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 KIAA1549LQ6ZVL6 1849 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 RIPK2O43353 540 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 ATP5BP06576 529 aaKnown RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 DCNP07585 359 aaKnown RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 NUDT17P0C025 328 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 POLR2EP19388 210 aaKnown RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 HLA-FP30511 346 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 CD70P32970 193 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 MAGEA3P43357 314 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 CSNK1DP48730 415 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 DGKGP49619 791 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 SERPINH1P50454 418 aaKnown RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 STARD6P59095 220 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 PRKCQQ04759 706 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 LAMB3Q13751 1172 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 GRM2Q14416 872 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 MLF2Q15773 248 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 KCTD19Q17RG1 926 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 WFDC5Q8TCV5 224 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 NUDCD1Q96RS6 583 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 TBL1YQ9BQ87 522 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 TRMT61BQ9BVS5 477 aaKnown RBP18.26■□□□□ 0.51
SYNE4-201ENST00000324444 CEP44Q9C0F1 390 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 ECT2Q9H8V3 914 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 CASS4Q9NQ75 786 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 SAMD15Q9P1V8 674 aa18.26■□□□□ 0.51
SYNE4-201ENST00000324444 VPS13AQ96RL7 3174 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 USP34Q70CQ2 3546 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 GOLGA6L10A6NI86 522 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 OPA1O60313 960 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 TMCC1O94876 653 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 CPP00450 1065 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 IVLP07476 585 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 EIF2DP41214 584 aaKnown RBP18.25■□□□□ 0.51
SYNE4-201ENST00000324444 RHOAP61586 193 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 AP1S1P61966 158 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 IFFO1Q0D2I5 559 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 RUNX3Q13761 415 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 EIF4HQ15056 248 aaKnown RBP18.25■□□□□ 0.51
SYNE4-201ENST00000324444 CYTH1Q15438 398 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 HSP90B2PQ58FF3 399 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 FNBP1LQ5T0N5 605 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 CAND1Q86VP6 1230 aaKnown RBP18.25■□□□□ 0.51
SYNE4-201ENST00000324444 APCDD1Q8J025 514 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 IQCKQ8N0W5 287 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 DNASE1L2Q92874 299 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 TTC17Q96AE7 1141 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 TADA1Q96BN2 335 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 SEMA3CQ99985 751 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 MLPHQ9BV36 600 aaPredicted RBP18.25■□□□□ 0.51
SYNE4-201ENST00000324444 IL22Q9GZX6 179 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 SEMA4AQ9H3S1 761 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 ARNT2Q9HBZ2 717 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 SCUBE2Q9NQ36 999 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 HPS4Q9NQG7 708 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 DNAJC17Q9NVM6 304 aaKnown RBP18.25■□□□□ 0.51
SYNE4-201ENST00000324444 ZNF446Q9NWS9 450 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 DEC1Q9P2X7 70 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
SYNE4-201ENST00000324444 MYO15AQ9UKN7 3530 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 A0A087WUV0 522 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ARNTLO00327 626 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 INSIG1O15503 277 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 SNAP91O60641 907 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 SRPRAP08240 638 aaKnown RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ARSAP15289 507 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ECT2LQ008S8 904 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 GRM3Q14832 879 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ANGPT1Q15389 498 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 TRIM68Q6AZZ1 485 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 GRAMD4Q6IC98 578 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 TSEN2Q8NCE0 465 aaKnown RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 FBXO36Q8NEA4 188 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 IPMKQ8NFU5 416 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 PJA1Q8NG27 643 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ARRDC2Q8TBH0 407 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 PTCD2Q8WV60 388 aaKnown RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 IFT43Q96FT9 208 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 OXNAD1Q96HP4 312 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 FEM1CQ96JP0 617 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ZFYVE19Q96K21 471 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ROPN1BQ9BZX4 212 aaPredicted RBP18.24■□□□□ 0.51
SYNE4-201ENST00000324444 BRD9Q9H8M2 597 aa18.24■□□□□ 0.51
SYNE4-201ENST00000324444 ROPN1Q9HAT0 212 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms