RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 VEPH1Q14D04 833 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 C6orf52Q5T4I8 152 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CGB2Q6NT52 195 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 TIFABQ6ZNK6 161 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 OTOP3Q7RTS5 596 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 TLK2Q86UE8 772 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CENPLQ8N0S6 344 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 METTL6Q8TCB7 284 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 MAGEE2Q8TD90 523 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CLK4Q9HAZ1 481 aaKnown RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 DHRS12A0PJE2 317 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 T-ENOLP0DO92 83 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 NELFEP18615 380 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 CD86P42081 329 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 WNT3AP56704 352 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 WNT7BP56706 349 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 CNPY1Q3B7I2 92 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TNFAIP8L3Q5GJ75 292 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 INTS6LQ5JSJ4 861 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TMCO5AQ8N6Q1 288 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 PQLC3Q8N755 202 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 OR56A4Q8NGH8 313 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 VPS33AQ96AX1 596 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FBXO44Q9H4M3 255 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 COL1A2P08123 1366 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 MAN1A2O60476 641 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 OXCT1P55809 520 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF252P-AS1Q0IIN9 211 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 DPYSQ14117 519 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 CDCA2Q69YH5 1023 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FSTL5Q8N475 847 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TRPC4APQ8TEL6 797 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 DACH2Q96NX9 599 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 USP29Q9HBJ7 922 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 SEMA4BQ9NPR2 832 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FZD10Q9ULW2 581 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 C22orf31O95567 290 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 HGFP14210 728 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TRAF2Q12933 501 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 PPIL2Q13356 520 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FAM45BPQ6NSW5 357 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 HERC6Q8IVU3 1022 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 OR52K2Q8NGK3 314 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 DNAJB14Q8TBM8 379 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FAM45AQ8TCE6 357 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 LPGAT1Q92604 370 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 CIB1Q99828 191 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 NOL11Q9H8H0 719 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 OLA1Q9NTK5 396 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FAM8A1Q9UBU6 413 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 C1orf232A0A0U1RR37 186 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 IPO13O94829 963 aaKnown RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 ATG7O95352 703 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 SMIM10L2AP0DMW4 78 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 SMIM10L2BP0DMW5 78 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF280AP59817 542 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-201ENST00000323668 SOWAHAQ2M3V2 549 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 SLC9B1Q4ZJI4 515 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 OLFML1Q6UWY5 402 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 HORMAD1Q86X24 394 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 MYO1HQ8N1T3 1032 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 FAM47BQ8NA70 645 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
TCOF1-201ENST00000323668 TTLL13PA6NNM8 815 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 BTN3A1O00481 513 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 BUD23O43709 281 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 DARSP14868 501 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 GNAZP19086 355 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 GLUD2P49448 558 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TTLL9Q3SXZ7 439 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 DCLRE1AQ6PJP8 1040 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 SATL1Q86VE3 508 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TINF2Q9BSI4 451 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 HGH1Q9BTY7 390 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TOP3BO95985 862 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 LMO2P25791 158 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TRPC1P48995 793 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 POLD2P49005 469 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 C21orf59P57076 290 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 BNIP2Q12982 314 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 NCBP2-AS2Q69YL0 99 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 ZDHHC13Q8IUH4 622 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 MAGED4Q96JG8 741 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 SLC9A7Q96T83 725 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 HNRNPABQ99729 332 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 CLPBQ9H078 707 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 SLC8A2Q9UPR5 921 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 MYH4Q9Y623 1939 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 RGS20O76081 388 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 CHRNGP07510 517 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 LINGO3P0C6S8 592 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 ITGAXP20702 1163 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 NMBRP28336 390 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms