RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 MAPKAPK2P49137 400 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 SERPINH1P50454 418 aaKnown RBP20.28■□□□□ 0.84
PDZD3-201ENST00000322712 CSE1LP55060 971 aaKnown RBP20.28■□□□□ 0.84
PDZD3-201ENST00000322712 SIRPB2Q5JXA9 342 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 ZNF470Q6ECI4 717 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 RAPH1Q70E73 1250 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 ASRGL1Q7L266 308 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 TTC7BQ86TV6 843 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 TTC16Q8NEE8 873 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 ZNF398Q8TD17 642 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 FATE1Q969F0 183 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 SLC22A12Q96S37 553 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 GPR22Q99680 433 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 RC3H2Q9HBD1 1191 aaKnown RBP20.28■□□□□ 0.84
PDZD3-201ENST00000322712 PDFQ9HBH1 243 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 ACSS2Q9NR19 701 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 GEMIN8Q9NWZ8 242 aaKnown RBP20.28■□□□□ 0.84
PDZD3-201ENST00000322712 TRPM5Q9NZQ8 1165 aa20.28■□□□□ 0.84
PDZD3-201ENST00000322712 CPSF2Q9P2I0 782 aaKnown RBP20.28■□□□□ 0.84
PDZD3-201ENST00000322712 PRRG1O14668 218 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 HOXD9P28356 352 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 SLC11A2P49281 568 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 GNA12Q03113 381 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 PREPLQ4J6C6 727 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ZNF789Q5FWF6 425 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 IL31Q6EBC2 164 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 CLEC14AQ86T13 490 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 TMEM150AQ86TG1 271 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ALYREFQ86V81 257 aaKnown RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 SPATA6LQ8N4H0 392 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 PPP1R2P1Q96PQ5 205 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 UNKQ9C0B0 810 aaKnown RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 RHOJQ9H4E5 214 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ARNT2Q9HBZ2 717 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 MGRN1O60291 552 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 KRT16P08779 473 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 YBEYP58557 167 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ELF3P78545 371 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 USP10Q14694 798 aaKnown RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 PTPRCAPQ14761 206 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 INSCQ1MX18 579 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 CTC1Q2NKJ3 1217 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 C16orf59Q7L2K0 433 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 DNAJB7Q7Z6W7 309 aaPredicted RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 RNF135Q8IUD6 432 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 CEP97Q8IW35 865 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 PDZD8Q8NEN9 1154 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 MAGEC3Q8TD91 643 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 NSMCE3Q96MG7 304 aa20.27■□□□□ 0.84
PDZD3-201ENST00000322712 AGO1Q9UL18 857 aaKnown RBP20.27■□□□□ 0.84
PDZD3-201ENST00000322712 ANAPC1Q9H1A4 1944 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 BUD23O43709 281 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 HAUS5O94927 633 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 ATXN1LP0C7T5 689 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 PIRTP0C851 137 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 NQO1P15559 274 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 WDR5P61964 334 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 ITGA9Q13797 1035 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 C5orf22Q49AR2 442 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CCDC117Q8IWD4 279 aaPredicted RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CNTN4Q8IWV2 1026 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 OR13J1Q8NGT2 312 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 TADA1Q96BN2 335 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 EXOC2Q96KP1 924 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 MYRFLQ96LU7 910 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CDK5RAP1Q96SZ6 601 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 VPS45Q9NRW7 570 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CHD5Q8TDI0 1954 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CPA3P15088 417 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 GLRBP48167 497 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 SLC1A6P48664 564 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 AQP5P55064 265 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 GALNT3Q14435 633 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 ZNF235Q14590 738 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 TMCO4Q5TGY1 634 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 OTOP2Q7RTS6 562 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 LDB1Q86U70 411 aaPredicted RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CRLF3Q8IUI8 442 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 SKA1Q96BD8 255 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 MRM3Q9HC36 420 aaKnown RBP20.26■□□□□ 0.83
PDZD3-201ENST00000322712 THAP1Q9NVV9 213 aa20.26■□□□□ 0.83
PDZD3-201ENST00000322712 CDH23Q9H251 3354 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 ABHD14A-ACY1A0A1B0GW23 586 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 CSPG5O95196 566 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 MPOP05164 745 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 SLC35E2BP0CK96 405 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 RGRP47804 291 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 CSRP3P50461 194 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 ARSDP51689 593 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 ZXDBP98169 803 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 ZBTB16Q05516 673 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 THOC5Q13769 683 aaKnown RBP20.25■□□□□ 0.83
PDZD3-201ENST00000322712 KLHDC10Q6PID8 442 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 RAB3IL1Q8TBN0 382 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 PTCD2Q8WV60 388 aaKnown RBP20.25■□□□□ 0.83
PDZD3-201ENST00000322712 OVCA2Q8WZ82 227 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 POLR1EQ9GZS1 481 aaKnown RBP20.25■□□□□ 0.83
PDZD3-201ENST00000322712 TRPC7Q9HCX4 862 aa20.25■□□□□ 0.83
PDZD3-201ENST00000322712 ZNF334Q9HCZ1 680 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms