RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 N6AMT1Q9Y5N5 214 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SUPT20HL2P0C7V6 817 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC25A3Q00325 362 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 AMPD2Q01433 879 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 GALNT18Q6P9A2 607 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 AAGABQ6PD74 315 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 PACS1Q6VY07 963 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 PCDH20Q8N6Y1 951 aaKnown RBP17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 ARL10Q8N8L6 244 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 RLN1P04808 185 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SPESP1Q6UW49 350 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 TFAP2DQ7Z6R9 452 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 BSNDQ8WZ55 320 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SAE1Q9UBE0 346 aaPredicted RBP17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 THRBP10828 461 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 BMP7P18075 431 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 EIF2S3P41091 472 aaKnown RBP17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 KCNT2Q6UVM3 1135 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 ARHGEF33A8MVX0 844 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 PRODHO43272 600 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 TPH1P17752 444 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 TTPAP49638 278 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 ARFIP1P53367 373 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 MREGQ8N565 214 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 HDAC7Q8WUI4 952 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 HTRA1Q92743 480 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 CEP41Q9BYV8 373 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC25A12O75746 678 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 TCEA2Q15560 299 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 NKAPQ8N5F7 415 aaKnown RBP17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 RASSF1Q9NS23 344 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 HMGCRP04035 888 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ATF6P18850 670 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 LAMTOR4Q0VGL1 99 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SEZ6Q53EL9 994 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 TRIM40Q6P9F5 258 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SEPT12Q8IYM1 358 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 MED28Q9H204 178 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 A0A1W2PQ72 361 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 PCP4L1A6NKN8 68 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 MAP2K7O14733 419 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SERPINB7O75635 380 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC6A2P23975 617 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ISLR2Q6UXK2 745 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 KIAA0895Q8NCT3 520 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 RBM4BQ9BQ04 359 aaKnown RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 RBM4Q9BWF3 364 aaKnown RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 DNAJC18Q9H819 358 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SUN5Q8TC36 379 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ITCHQ96J02 903 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ETNK2Q9NVF9 386 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ANKDD1BA6NHY2 528 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 NOS1APO75052 506 aaPredicted RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 LYPLAL1Q5VWZ2 237 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 PTCHD4Q6ZW05 846 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 MBOAT7Q96N66 472 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ELL3Q9HB65 397 aaPredicted RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC12A4Q9UP95 1085 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 ACSL4O60488 711 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 CELF6Q96J87 481 aaKnown RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 C12orf4Q9NQ89 552 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 MGAT4AQ9UM21 535 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 OR10H3O60404 316 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 SULT1C3Q6IMI6 304 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 FNDC11Q9BVV2 318 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 FAIM2Q9BWQ8 316 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 A0A0A0MRY4 1105 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SPTLC1O15269 473 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 TSHRP16473 764 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 OGNP20774 298 aaKnown RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 PEX5LQ8IYB4 626 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC9A6Q92581 669 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 SPATA13Q96N96 652 aa17■□□□□ 0.31
SMCHD1-201ENST00000320876 POLR1EQ9GZS1 481 aaKnown RBP17■□□□□ 0.31
SMCHD1-201ENST00000320876 URODP06132 367 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 ETS2P15036 469 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TAS2R41P59536 307 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 PIH1D1Q9NWS0 290 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 PPIEQ9UNP9 301 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 BBIP1A8MTZ0 92 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 SLC4A5Q9BY07 1137 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 MOV10Q9HCE1 1003 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 FAM50BQ9Y247 325 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 SUV39H1O43463 412 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 CYP4B1P13584 511 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 RPL4P36578 427 aaKnown RBP16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 SCUBE3Q8IX30 993 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 TBC1D21Q8IYX1 336 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 KLQ9UEF7 1012 aa16.99■□□□□ 0.31
SMCHD1-201ENST00000320876 APOC1P02654 83 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms