RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TRIM67Q6ZTA4 783 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 PTAR1Q7Z6K3 402 aaPredicted RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 SPATA2LQ8IUW3 424 aaPredicted RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 GPR152Q8TDT2 470 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 CATSPERBQ9H7T0 1116 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 NMUR1Q9HB89 426 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 ARHGEF38Q9NXL2 777 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 IPO11Q9UI26 975 aaKnown RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 GIT1Q9Y2X7 761 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 TLL2Q9Y6L7 1015 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 CD151P48509 253 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 GEMP55040 296 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 WNT3AP56704 352 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 GSTA3Q16772 222 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 FAM171BQ6P995 826 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 BNC2Q6ZN30 1099 aaPredicted RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 OR6P1Q8NGX9 317 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 ZNF483Q8TF39 744 aaPredicted RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 MRGPRX2Q96LB1 330 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 GPR78Q96P69 363 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 NEU3Q9UQ49 428 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 A0A1W2PQH9 124 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 CCDC189A1A4V9 331 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 H3BNX3 289 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 VCLP18206 1134 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 KCNA5P22460 613 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
COL9A1-201ENST00000320755 ADAM2Q99965 735 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 MRPL46Q9H2W6 279 aaKnown RBP17.59■□□□□ 0.41
COL9A1-201ENST00000320755 PAPOLBQ9NRJ5 636 aaKnown RBP17.59■□□□□ 0.41
COL9A1-201ENST00000320755 ASB3Q9Y575 518 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 AK5Q9Y6K8 562 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 AP3B1O00203 1094 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 PRDX6P30041 224 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 MS4A2Q01362 244 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 TSPY1Q01534 308 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 RDH11Q8TC12 318 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 TSGA13Q96PP4 275 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 SERPINI1Q99574 410 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 IL12RB2Q99665 862 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 WDR41Q9HAD4 459 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 ABCC13Q9NSE7 274 aa17.59■□□□□ 0.41
COL9A1-201ENST00000320755 COPG1Q9Y678 874 aaKnown RBP17.59■□□□□ 0.41
COL9A1-201ENST00000320755 TARM1B6A8C7 271 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 E9PAM4 449 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 CPB1P15086 417 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 ETFBP38117 255 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 ALDH1A3P47895 512 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 C16orf89Q6UX73 402 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 SCD5Q86SK9 330 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 ADGRG6Q86SQ4 1221 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 PCDH20Q8N6Y1 951 aaKnown RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 RP9Q8TA86 221 aaKnown RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 EXT2Q93063 718 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 UBE2OQ9C0C9 1292 aaKnown RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 VCX3BQ9H321 246 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 SPATS2LQ9NUQ6 558 aaKnown RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 ADA2Q9NZK5 511 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 PDP2Q9P2J9 529 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 STK39Q9UEW8 545 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 MTF2Q9Y483 593 aaPredicted RBP17.58■□□□□ 0.41
COL9A1-201ENST00000320755 HS3ST4Q9Y661 456 aa17.58■□□□□ 0.41
COL9A1-201ENST00000320755 J3KR12 359 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF189O75820 626 aaPredicted RBP17.58■□□□□ 0.4
COL9A1-201ENST00000320755 HDCP19113 662 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 CEACAM7Q14002 265 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 DDR2Q16832 855 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 SLC39A12Q504Y0 691 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 SLC30A9Q6PML9 568 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 GK5Q6ZS86 529 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 KDM1BQ8NB78 822 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 ICA1LQ8NDH6 482 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 OLFM1Q99784 485 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.4
COL9A1-201ENST00000320755 ENTPD7Q9NQZ7 604 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 NCKIPSDQ9NZQ3 722 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 GPR182O15218 404 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 CCDC166P0CW27 439 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 UQCRBP14927 111 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 PAMP19021 973 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 CD86P42081 329 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 DPP6P42658 865 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 GPR15P49685 360 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 POTEHQ6S545 545 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 THEM5Q8N1Q8 247 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 BHLHE22Q8NFJ8 381 aaPredicted RBP17.58■□□□□ 0.4
COL9A1-201ENST00000320755 RSPH1Q8WYR4 309 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.4
COL9A1-201ENST00000320755 OR51F1A6NGY5 319 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 HMBSP08397 361 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF135P52742 658 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-201ENST00000320755 HUNKP57058 714 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 RYBPQ8N488 228 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-201ENST00000320755 TRPV1Q8NER1 839 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 IFT43Q96FT9 208 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms