RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ESRRAP11474 423 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 CCL5P13501 91 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC6A4P31645 630 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 HADHAP40939 763 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 RPS24P62847 133 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 IKBKEQ14164 716 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 LBRQ14739 615 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 TAF12Q16514 161 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 TRIM60Q495X7 471 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC39A5Q6ZMH5 540 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 LONP2Q86WA8 852 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CNTN4Q8IWV2 1026 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SUGP1Q8IWZ8 645 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 GPATCH11Q8N954 259 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ARRDC2Q8TBH0 407 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 MOCOSQ96EN8 888 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 NSL1Q96IY1 281 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 TSNARE1Q96NA8 513 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SEMA3CQ99985 751 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CLSTN3Q9BQT9 956 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 TTLL2Q9BWV7 592 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 PRKD2Q9BZL6 878 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CYP4F11Q9HBI6 524 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ARNT2Q9HBZ2 717 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ACSS2Q9NR19 701 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 GKN1Q9NS71 199 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 PNPOQ9NVS9 261 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 COMMD8Q9NX08 183 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ACTL7AQ9Y615 435 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ZFP37Q9Y6Q3 630 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 FAM95CA0A1B0GW59 222 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 CCL22O00626 93 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 TRAFD1O14545 582 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 MUSKO15146 869 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 COCHO43405 550 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 ACSL4O60488 711 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 STMN1P16949 149 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 SLC11A2P49281 568 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 YBEYP58557 167 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 ABCE1P61221 599 aaKnown RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 ZNF235Q14590 738 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 E2F5Q15329 346 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 HECTD3Q5T447 861 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 ACBD5Q5T8D3 534 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 IL31Q6EBC2 164 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 KIAA0930Q6ICG6 404 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 NAPRTQ6XQN6 538 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 ANKRD33Q7Z3H0 272 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 PTAR1Q7Z6K3 402 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 CEP97Q8IW35 865 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 MFSD6LQ8IWD5 586 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 TEX26Q8N6G2 289 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 OR52K2Q8NGK3 314 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 ZNF461Q8TAF7 563 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 AGR3Q8TD06 166 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 KCTD4Q8WVF5 259 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 PTCD3Q96EY7 689 aaKnown RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 SORT1Q99523 831 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 MIPEPQ99797 713 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 SPON2Q9BUD6 331 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 ACE2Q9BYF1 805 aaPredicted RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 POLR1EQ9GZS1 481 aaKnown RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 MRM3Q9HC36 420 aaKnown RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 PCDH10Q9P2E7 1040 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 LNPEPQ9UIQ6 1025 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 FBXO5Q9UKT4 447 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 OGDHLQ9ULD0 1010 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 RUVBL2Q9Y230 463 aaKnown RBP7.65□□□□□ -1.19
IFT88-201ENST00000319980 ACOT9Q9Y305 439 aa7.65□□□□□ -1.19
IFT88-201ENST00000319980 GYG2O15488 501 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 TRIM13O60858 407 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 ENO1P06733 434 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 CALB2P22676 271 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 CPA2P48052 419 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 MAPKAPK2P49137 400 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SLC12A1Q13621 1099 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 RCN2Q14257 317 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SIRPB2Q5JXA9 342 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SNX30Q5VWJ9 437 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 CNSTQ6PJW8 725 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 FSTL5Q8N475 847 aaPredicted RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 C2CD4AQ8NCU7 369 aaPredicted RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 OR7D4Q8NG98 312 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 OR6P1Q8NGX9 317 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 FATE1Q969F0 183 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 ELMO2Q96JJ3 720 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SCYL1Q96KG9 808 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 CDK5RAP1Q96SZ6 601 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 NDNQ99608 321 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 TUBB6Q9BUF5 446 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 CWH43Q9H720 699 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 ATP13A1Q9HD20 1204 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 L3MBTL1Q9Y468 752 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 BACE2Q9Y5Z0 518 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 PATJQ8NI35 1801 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 BUD23O43709 281 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 PRAMEF11O60813 436 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms