RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 ACSBG2Q5FVE4 666 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 C1orf53Q5VUE5 145 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 MYEOVQ96EZ4 313 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 ZNF570Q96NI8 536 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 ANKRD27Q96NW4 1050 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 FSD1LQ9BXM9 530 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 TCAF1Q9Y4C2 921 aa28.82■■■□□ 2.2
TUBB6-201ENST00000317702 TRIM13O60858 407 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 H2AFYO75367 372 aaKnown RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 PMPCBO75439 489 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 SEC24AO95486 1093 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 MYL4P12829 197 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 USP10Q14694 798 aaKnown RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 DNAL1Q4LDG9 190 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 NADSYN1Q6IA69 706 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 NAPRTQ6XQN6 538 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 CFAP61Q8NHU2 1237 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 N4BP2L2Q92802 583 aaPredicted RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 CLSTN3Q9BQT9 956 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 MRM3Q9HC36 420 aaKnown RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 TMEM39AQ9NV64 488 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 ZNF212Q9UDV6 495 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 PLA2G4CQ9UP65 541 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 DRGXA6NNA5 263 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 VAPBO95292 243 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 HSPA4LO95757 839 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 AHSGP02765 367 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 GABRB3P28472 473 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 ELF1P32519 619 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 ESRP1Q6NXG1 681 aaKnown RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 CIR1Q86X95 450 aaPredicted RBP28.81■■■□□ 2.2
TUBB6-201ENST00000317702 WDR60Q8WVS4 1066 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 C1orf21Q9H246 121 aa28.81■■■□□ 2.2
TUBB6-201ENST00000317702 SIN3BO75182 1162 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 ARCN1P48444 511 aaKnown RBP28.8■■■□□ 2.2
TUBB6-201ENST00000317702 KCNQ1P51787 676 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 KIAA1841Q6NSI8 718 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.8■■■□□ 2.2
TUBB6-201ENST00000317702 MRGPRX2Q96LB1 330 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 TSNARE1Q96NA8 513 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 C1QTNF1Q9BXJ1 281 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 TASP1Q9H6P5 420 aa28.8■■■□□ 2.2
TUBB6-201ENST00000317702 CPSF2Q9P2I0 782 aaKnown RBP28.8■■■□□ 2.2
TUBB6-201ENST00000317702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 J3KR12 359 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 SAT1P21673 171 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 LCA5Q86VQ0 697 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 RDH11Q8TC12 318 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 ACE2Q9BYF1 805 aaPredicted RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 OXSMQ9NWU1 459 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 SEC23IPQ9Y6Y8 1000 aaKnown RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 PHGDHO43175 533 aaKnown RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 ARNTP27540 789 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 PTDSS1P48651 473 aaKnown RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 TUFMP49411 452 aaKnown RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 VWA5B1Q5TIE3 1220 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 RANBP10Q6VN20 620 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 ZNF781Q8N8C0 355 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 FAM161BQ96MY7 647 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 RPRD1AQ96P16 312 aaPredicted RBP28.79■■■□□ 2.2
TUBB6-201ENST00000317702 CDH19Q9H159 772 aa28.79■■■□□ 2.2
TUBB6-201ENST00000317702 TM7SF2O76062 418 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 MXRA7P84157 204 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SLC12A1Q13621 1099 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SPOUT1Q5T280 376 aaKnown RBP28.78■■■□□ 2.2
TUBB6-201ENST00000317702 FAM117BQ6P1L5 589 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 DENND6AQ8IWF6 608 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 TOP1MTQ969P6 601 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 AFF4Q9UHB7 1163 aaKnown RBP28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SLC35E2BP0CK96 405 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 MPP1Q00013 466 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 CTBP1Q13363 440 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 ZYG11AQ6WRX3 759 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SLC41A1Q8IVJ1 513 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SCUBE1Q8IWY4 988 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 ZNF689Q96CS4 500 aaPredicted RBP28.78■■■□□ 2.2
TUBB6-201ENST00000317702 GATA5Q9BWX5 397 aaPredicted RBP28.78■■■□□ 2.2
TUBB6-201ENST00000317702 SLC2A6Q9UGQ3 507 aa28.78■■■□□ 2.2
TUBB6-201ENST00000317702 DOCK4Q8N1I0 1966 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 TK2O00142 265 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 SOD2P04179 222 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 TACR2P21452 398 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 POLD2P49005 469 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 USP4Q13107 963 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 RCN1Q15293 331 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 TMEM151AQ8N4L1 468 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 CEP295NLQ96MC4 621 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 KLHL5Q96PQ7 755 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 ATXN3LQ9H3M9 355 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 TREX1Q9NSU2 369 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 STOML1Q9UBI4 398 aa28.77■■■□□ 2.2
TUBB6-201ENST00000317702 KRT36O76013 467 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 GJB5O95377 273 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 PSMG1O95456 288 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 COL6A2P12110 1019 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 HMGA1P17096 107 aaKnown RBP28.76■■■□□ 2.19
TUBB6-201ENST00000317702 PAMP19021 973 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 DNAJB1P25685 340 aa28.76■■■□□ 2.19
TUBB6-201ENST00000317702 DEFB103AP81534 67 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms