RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 RBM15Q96T37 977 aaKnown RBP eCLIP22.71■■□□□ 1.235e-7■■■□□ 18.8
CCDC85B-201ENST00000312579 ERP44Q9BS26 406 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 GBA3Q9H227 469 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 DPH5Q9H2P9 285 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 MFSD1Q9H3U5 465 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 PCDH9Q9HC56 1237 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 ARFGAP3Q9NP61 516 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 SCUBE2Q9NQ36 999 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 PRSS16Q9NQE7 514 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 FAM114A2Q9NRY5 505 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 C2orf42Q9NWW7 574 aa22.71■■□□□ 1.23
CCDC85B-201ENST00000312579 MT-CYBP00156 380 aaPredicted RBP22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 GSRP00390 522 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 CD86P42081 329 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 SNRPD1P62314 119 aaKnown RBP22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 GPS1Q13098 491 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 CUL1Q13616 776 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 MYLK3Q32MK0 819 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 PRPF39Q86UA1 669 aaKnown RBP22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 GSPT2Q8IYD1 628 aaKnown RBP22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 OXNAD1Q96HP4 312 aaPredicted RBP22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 NUDCD1Q96RS6 583 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 NELL2Q99435 816 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 GABRG3Q99928 467 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 TRIM31Q9BZY9 425 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 PAK5Q9P286 719 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 MUC3AQ02505 3323 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 TECTAO75443 2155 aa22.7■■□□□ 1.22
CCDC85B-201ENST00000312579 TTC28Q96AY4 2481 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 NPC1O15118 1278 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 CTSLP07711 333 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 HOXB2P14652 356 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 HSPA9P38646 679 aaKnown RBP22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 CARSP49589 748 aaKnown RBP22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 NSUN2Q08J23 767 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 PTK6Q13882 451 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 CWF19L1Q69YN2 538 aaKnown RBP22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 ALG1LQ6GMV1 187 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 SDE2Q6IQ49 451 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 GRIN3AQ8TCU5 1115 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 IMP4Q96G21 291 aaKnown RBP22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 SLC25A51Q9H1U9 297 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 ZDHHC6Q9H6R6 413 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 ETNK1Q9HBU6 452 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 RAB6BQ9NRW1 208 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 SUN2Q9UH99 717 aa22.69■■□□□ 1.22
CCDC85B-201ENST00000312579 A0A1W2PQF6 199 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 PI15O43692 258 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 ZNF189O75820 626 aaPredicted RBP22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 PIGNO95427 931 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 MYBL2P10244 700 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 ACTN2P35609 894 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 RECQLP46063 649 aaPredicted RBP22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 SKOR1P84550 965 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 DUPD1Q68J44 220 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 ITPRIPL1Q6GPH6 555 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 NCEH1Q6PIU2 408 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 TMEM92Q6UXU6 159 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 SEC14L1Q92503 715 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 FCRL5Q96RD9 977 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 MLPHQ9BV36 600 aaPredicted RBP22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 ASIC3Q9UHC3 531 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 SIT1Q9Y3P8 196 aa22.68■■□□□ 1.22
CCDC85B-201ENST00000312579 TMEM221A6NGB7 291 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 M0R296 226 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SYNCRIPO60506 623 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 OLIG2Q13516 323 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 HLTFQ14527 1009 aaKnown RBP eCLIP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 PARP6Q2NL67 630 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 POM121L1PQ3SYA9 428 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 TRMT11Q7Z4G4 463 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 KDELC2Q7Z4H8 507 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 CACUL1Q86Y37 369 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 EIF1ADQ8N9N8 165 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 FAM129BQ96TA1 746 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SLC6A17Q9H1V8 727 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 MMP17Q9ULZ9 603 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 NFU1Q9UMS0 254 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 PCDHGC4Q9Y5F7 938 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 PMPCBO75439 489 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SEC31AO94979 1220 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 POP4O95707 220 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 ADCY8P40145 1251 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 BASP1P80723 227 aaKnown RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 CAMK2GQ13555 558 aaPredicted RBP22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SPARCL1Q14515 664 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 E2F5Q15329 346 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 TRADDQ15628 312 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 PCSK7Q16549 785 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 ARSIQ5FYB1 569 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 CAMK1DQ8IU85 385 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SYNPOQ8N3V7 929 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 CLDN23Q96B33 292 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 HEPHQ9BQS7 1158 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SARDHQ9UL12 918 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 SNX24Q9Y343 169 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 WASF2Q9Y6W5 498 aa22.67■■□□□ 1.22
CCDC85B-201ENST00000312579 LEFTY1O75610 366 aa22.66■■□□□ 1.22
CCDC85B-201ENST00000312579 ALADP13716 330 aa22.66■■□□□ 1.22
CCDC85B-201ENST00000312579 CSNK1DP48730 415 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms