RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 USP30Q70CQ3 517 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 RHOT1Q8IXI2 618 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 FAM131CQ96AQ9 280 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 NCKAP1Q9Y2A7 1128 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 COQ6Q9Y2Z9 468 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 TMEM131Q92545 1883 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 A0A1W2PQU0 124 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 C4orf47A7E2U8 309 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 PJA2O43164 708 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ADRB3P13945 408 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 GARSP41250 739 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 SNRPD1P62314 119 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 GALNT2Q10471 571 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 AASDHQ4L235 1098 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 INO80DQ53TQ3 878 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 GDPD4Q6W3E5 623 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 TMIEQ8NEW7 156 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ISG20Q96AZ6 181 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 LOXL4Q96JB6 756 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 BRD8Q9H0E9 1235 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 NOD2Q9HC29 1040 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 TM9SF3Q9HD45 589 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 NT5MQ9NPB1 228 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 LZTFL1Q9NQ48 299 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 GUCA1BQ9UMX6 200 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 PCDH15Q96QU1 1955 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 ANKRD36A6QL64 1941 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 TCRBV7S2A1N4TA0A589 114 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 RNGTTO60942 597 aaKnown RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 PCDH8O95206 1070 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 PYGMP11217 842 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 TIMP2P16035 220 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 OXTRP30559 389 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 HTR7P34969 479 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 IL9RQ01113 521 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 DSC2Q02487 901 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 BYSLQ13895 437 aaKnown RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 PDK2Q15119 407 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 UAP1L1Q3KQV9 507 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 SLC9A4Q6AI14 798 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 SPOCD1Q6ZMY3 1216 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 NT5DC3Q86UY8 548 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 ATPAF2Q8N5M1 289 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 CNTD1Q8N815 330 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 C12orf50Q8NA57 414 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 CCNYQ8ND76 341 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 WRAP53Q9BUR4 548 aaKnown RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 EDEM2Q9BV94 578 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 CINPQ9BW66 212 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-201ENST00000311943 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 SGK2Q9HBY8 427 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 FZD4Q9ULV1 537 aa12.19□□□□□ -0.46
SCFD1-201ENST00000311943 KHNYNO15037 678 aaKnown RBP12.18□□□□□ -0.46
SCFD1-201ENST00000311943 CST8O60676 142 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 MMP20O60882 483 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 POP4O95707 220 aaKnown RBP12.18□□□□□ -0.46
SCFD1-201ENST00000311943 GSRP00390 522 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 PRNPP04156 253 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 HLA-DQB2P05538 268 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 PDHA1P08559 390 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 PEX5P50542 639 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 NIPAL4Q0D2K0 466 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 ZNF805Q5CZA5 627 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
SCFD1-201ENST00000311943 FBXL19Q6PCT2 694 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 SRLQ86TD4 932 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 TTC7BQ86TV6 843 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 CCDC50Q8IVM0 306 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 OR2T34Q8NGX1 318 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 CAMK1GQ96NX5 476 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
SCFD1-201ENST00000311943 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 FADS3Q9Y5Q0 445 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 SNX11Q9Y5W9 270 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 hCG_1818297A0A087WSY0 165 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 A0A1W2PPC4 97 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 IGLON5A6NGN9 336 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 GIPC1O14908 333 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 ALOX15BO15296 676 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
SCFD1-201ENST00000311943 IGSF6O95976 241 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 CR2P20023 1033 aa12.18□□□□□ -0.46
SCFD1-201ENST00000311943 ITGB7P26010 798 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms