RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CEP41Q9BYV8 373 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TASP1Q9H6P5 420 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 KLHL3Q9UH77 587 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 SEPT9Q9UHD8 586 aaPredicted RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TOR1BO14657 336 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 GCATO75600 419 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 IL18RAPO95256 599 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 ADAM17P78536 824 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 CA9Q16790 459 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 UTS2BQ765I0 119 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 CCNYL1Q8N7R7 359 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 REPS2Q8NFH8 660 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 RXFP2Q8WXD0 754 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TOP1MTQ969P6 601 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 SH3YL1Q96HL8 342 aaPredicted RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 AGAP2Q99490 1192 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 ACE2Q9BYF1 805 aaPredicted RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 PDZD7Q9H5P4 517 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 HOXC10Q9NYD6 342 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 WARS2Q9UGM6 360 aaKnown RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 MKI67P46013 3256 aaKnown RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 EIF3FO00303 357 aaPredicted RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TRIM24O15164 1050 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 C2P06681 752 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TGM2P21980 687 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TNFSF9P41273 254 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 PTPN9P43378 593 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TMBIM6P55061 237 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 SP2Q02086 613 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 OCA2Q04671 838 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 PRKAA1Q13131 559 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 SELENBP1Q13228 472 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 OR13F1Q8NGS4 319 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TMEM143Q96AN5 459 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 SYBUQ9NX95 663 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 TRIM64A6NGJ6 449 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 ATG7O95352 703 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 ZNF143P52747 638 aaPredicted RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 STX5Q13190 355 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 AGKQ53H12 422 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 CCDC60Q8IWA6 550 aaPredicted RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 SEPT8Q92599 483 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 PIWIL1Q96J94 861 aaKnown RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 SCYL1Q96KG9 808 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 CSF3RQ99062 836 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 POLE4Q9NR33 117 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 PKD2L2Q9NZM6 624 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 IFT80Q9P2H3 777 aaPredicted RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 K7ERI5 159 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 EI24O14681 340 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 NCAM1P13591 858 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 PGAM1P18669 254 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 SLC7A2P52569 658 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 TRAP1Q12931 704 aaKnown RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 MAPK11Q15759 364 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 HEATR6Q6AI08 1181 aaKnown RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 REP15Q6BDI9 236 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 NIPA1Q7RTP0 329 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 CDKL3Q8IVW4 592 aaPredicted RBP18.21■□□□□ 0.51
SPSB4-201ENST00000310546 NETO2Q8NC67 525 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 OR2T34Q8NGX1 318 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 OR2T3Q8NH03 318 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 SNX19Q92543 992 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 CERS2Q96G23 380 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 VRTNQ9H8Y1 702 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 PARVBQ9HBI1 364 aa18.21■□□□□ 0.51
SPSB4-201ENST00000310546 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 KRT75O95678 551 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 ATP6V1B2P21281 511 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 GPD1P21695 349 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 JAK3P52333 1124 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 CDH8P55286 799 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 NSUN2Q08J23 767 aaKnown RBP eCLIP18.2■□□□□ 0.5
SPSB4-201ENST00000310546 GRM1Q13255 1194 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 TRNP1Q6NT89 227 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 ACVR1CQ8NER5 493 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 CPNE1Q99829 537 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 EGFL7Q9UHF1 273 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 JRKO75564 520 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 HSPA8P11142 646 aaKnown RBP18.2■□□□□ 0.5
SPSB4-201ENST00000310546 SPRP35270 261 aaPredicted RBP18.2■□□□□ 0.5
SPSB4-201ENST00000310546 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
SPSB4-201ENST00000310546 GRSF1Q12849 480 aaKnown RBP eCLIP18.2■□□□□ 0.5
SPSB4-201ENST00000310546 LRP8Q14114 963 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF846Q147U1 533 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 GRTP1Q5TC63 336 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 LIPMQ5VYY2 423 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 SWSAP1Q6NVH7 229 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 PIGZQ86VD9 579 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 SPPL2CQ8IUH8 684 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 DHRSXQ8N5I4 330 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 NAT16Q8N8M0 369 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 URGCPQ8TCY9 931 aa18.2■□□□□ 0.5
SPSB4-201ENST00000310546 MAGEE2Q8TD90 523 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms