RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 EMCNQ9ULC0 261 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 MPOP05164 745 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 C8AP07357 584 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 BPGMP07738 259 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 HADHAP40939 763 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 CYP4F8P98187 520 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 RFTN1Q14699 578 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-201ENST00000309469 CXorf57Q6NSI4 855 aaKnown RBP21.49■■□□□ 1.03
ATG4D-201ENST00000309469 UBE2Q1Q7Z7E8 422 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 ZC3HC1Q86WB0 502 aaKnown RBP21.49■■□□□ 1.03
ATG4D-201ENST00000309469 TMC8Q8IU68 726 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 NUDCD3Q8IVD9 361 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 MICALL1Q8N3F8 863 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 IFT43Q96FT9 208 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 FEM1CQ96JP0 617 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 RAD9AQ99638 391 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 CINPQ9BW66 212 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-201ENST00000309469 RHOJQ9H4E5 214 aa21.49■■□□□ 1.03
ATG4D-201ENST00000309469 SCAMP3O14828 347 aaKnown RBP21.48■■□□□ 1.03
ATG4D-201ENST00000309469 TBL1XO60907 577 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 SIN3BO75182 1162 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 EPOP01588 193 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 AHSGP02765 367 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 CDK18Q07002 472 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 ACTN3Q08043 901 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-201ENST00000309469 THOC5Q13769 683 aaKnown RBP21.48■■□□□ 1.03
ATG4D-201ENST00000309469 UGP2Q16851 508 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 SPRED3Q2MJR0 410 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 TSTD2Q5T7W7 516 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 FYB2Q5VWT5 728 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 Q6ZNB5 142 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 E2F7Q96AV8 911 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 RMDN2Q96LZ7 410 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 TCF25Q9BQ70 676 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 MUC3BQ9H195 1237 aa21.48■■□□□ 1.03
ATG4D-201ENST00000309469 PLIN3O60664 434 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 PAPSS2O95340 614 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 IL1BP01584 269 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 SERPINF2P08697 491 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 GABRB3P28472 473 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 ERVFC1P60507 584 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 GRM3Q14832 879 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 ZNF783Q6ZMS7 281 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 DENND6AQ8IWF6 608 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 ACVR1CQ8NER5 493 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 SP7Q8TDD2 431 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 GPR22Q99680 433 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 CAB39LQ9H9S4 337 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 GGT7Q9UJ14 662 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 CBX4O00257 560 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 GFRA2O00451 464 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 C1RP00736 705 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 TROVE2P10155 538 aaKnown RBP eCLIP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 EN2P19622 333 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 HLA-DPA1P20036 260 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 IRX4P78413 519 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 CTBP1Q13363 440 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 ATG16L1Q676U5 607 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 CARNMT1Q8N4J0 409 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 MAB21L3Q8N8X9 362 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 HJURPQ8NCD3 748 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 RAB3IL1Q8TBN0 382 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 TMA16Q96EY4 203 aaKnown RBP21.47■■□□□ 1.03
ATG4D-201ENST00000309469 FAM167BQ9BTA0 163 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 USH1CQ9Y6N9 552 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 CAPN7Q9Y6W3 813 aa21.47■■□□□ 1.03
ATG4D-201ENST00000309469 ANAPC1Q9H1A4 1944 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 A0A096LPK6 155 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 MROH6A6NGR9 719 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 H0Y626 953 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 GSRP00390 522 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 GSTA1P08263 222 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 BMPR1AP36894 532 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 C1QTNF8P60827 252 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 OVGP1Q12889 678 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 CYTH1Q15438 398 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 CHI3L2Q15782 390 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 SLC14A2Q15849 920 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 DBN1Q16643 649 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 NEPROQ6NW34 567 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 PSRC1Q6PGN9 363 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-201ENST00000309469 NLRP9Q7RTR0 991 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 ELMOD1Q8N336 334 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 NOD2Q9HC29 1040 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 NPHS2Q9NP85 383 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 TMEM216Q9P0N5 145 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 SLC39A10Q9ULF5 831 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
ATG4D-201ENST00000309469 KIAA0100Q14667 2235 aaKnown RBP21.46■■□□□ 1.03
ATG4D-201ENST00000309469 MKI67P46013 3256 aaKnown RBP21.45■■□□□ 1.02
ATG4D-201ENST00000309469 E2F8A0AVK6 867 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 LCHNA4D1U4 455 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 PROCP04070 461 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 PRKCGP05129 697 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 FGF1P05230 155 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 CKMP06732 381 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 GMPRP36959 345 aa21.45■■□□□ 1.02
ATG4D-201ENST00000309469 SLC7A9P82251 487 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms