RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 MT-CO3P00414 261 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 ALPPL2P10696 532 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 CKMT1AP12532 417 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 HNRNPKP61978 463 aaKnown RBP eCLIP20.81■□□□□ 0.921e-7■■■■■ 34.1
RER1-201ENST00000306256 PDE1CQ14123 709 aaPredicted RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 MYLK3Q32MK0 819 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 SCYL2Q6P3W7 929 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 SLFN11Q7Z7L1 901 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 PARGQ86W56 976 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 DCP2Q8IU60 420 aaKnown RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 ZNF548Q8NEK5 533 aaPredicted RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 BBC3Q96PG8 261 aaPredicted RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 LIMA1Q9UHB6 759 aaKnown RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 IPO11Q9UI26 975 aaKnown RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 KLF15Q9UIH9 416 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 PCDHB1Q9Y5F3 818 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 U3KQA8 63 aa20.81■□□□□ 0.92
RER1-201ENST00000306256 COL27A1Q8IZC6 1860 aaPredicted RBP20.81■□□□□ 0.92
RER1-201ENST00000306256 TCRBV5S1A1TA0A578 114 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 SIGLEC16A6NMB1 481 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 FPGTO14772 594 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 SCAMP1O15126 338 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 CSF2P04141 144 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 NME1P15531 152 aaKnown RBP20.8■□□□□ 0.92
RER1-201ENST00000306256 EPHB2P29323 1055 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 RABIFP47224 123 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 MYL5Q02045 173 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 UBXN1Q04323 297 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 EFHC2Q5JST6 749 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 DNAJC24Q6P3W2 148 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 CACTIN-AS1Q8N1I8 211 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 RTL3Q8N8U3 475 aaKnown RBP20.8■□□□□ 0.92
RER1-201ENST00000306256 ANKRD20A12PQ8NF67 263 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 RAB7BQ96AH8 199 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 GDAP1L1Q96MZ0 367 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 MCEEQ96PE7 176 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 LOC400499M0QZD8 3231 aa20.8■□□□□ 0.92
RER1-201ENST00000306256 NEMP2A6NFY4 417 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 CREB3O43889 395 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 OPA1O60313 960 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 ITIH2P19823 946 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 EIF2S3P41091 472 aaKnown RBP20.79■□□□□ 0.92
RER1-201ENST00000306256 RPL7AP62424 266 aaKnown RBP20.79■□□□□ 0.92
RER1-201ENST00000306256 STX1AQ16623 288 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 SASS6Q6UVJ0 657 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 GDPD4Q6W3E5 623 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 ZSCAN30Q86W11 494 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 HMCESQ96FZ2 354 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 LENG8Q96PV6 779 aaPredicted RBP20.79■□□□□ 0.92
RER1-201ENST00000306256 AGPAT1Q99943 283 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 OSBPL1AQ9BXW6 950 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 ANO10Q9NW15 660 aa20.79■□□□□ 0.92
RER1-201ENST00000306256 LRP4O75096 1905 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 ZSCAN5CA6NGD5 496 aaPredicted RBP20.78■□□□□ 0.92
RER1-201ENST00000306256 RASA4BC9J798 803 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 H3BM21 787 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 AREL1O15033 823 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 RASA4O43374 803 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 JUNDP17535 347 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 ZNF143P52747 638 aaPredicted RBP20.78■□□□□ 0.92
RER1-201ENST00000306256 RHOAP61586 193 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 C1QBPQ07021 282 aaKnown RBP20.78■□□□□ 0.92
RER1-201ENST00000306256 EIF2B5Q13144 721 aaKnown RBP20.78■□□□□ 0.92
RER1-201ENST00000306256 ACAP1Q15027 740 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 APTXQ7Z2E3 356 aaKnown RBP20.78■□□□□ 0.92
RER1-201ENST00000306256 VPS36Q86VN1 386 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 RBFAQ8N0V3 343 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 DENND6BQ8NEG7 585 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 BAP1Q92560 729 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 ERGIC2Q96RQ1 377 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 DUSP23Q9BVJ7 150 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 FZD10Q9ULW2 581 aa20.78■□□□□ 0.92
RER1-201ENST00000306256 INSIG1O15503 277 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 MMP20O60882 483 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 IGSF6O95976 241 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 IGFALSP35858 605 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 PFN3P60673 137 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 OGDHQ02218 1023 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 CDKN3Q16667 212 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 DEFB133Q30KQ1 61 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 CDCP2Q5VXM1 449 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 LRRC69Q6ZNQ3 347 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 TTC7BQ86TV6 843 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 FAM181AQ8N9Y4 354 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 SNIP1Q8TAD8 396 aaKnown RBP20.77■□□□□ 0.92
RER1-201ENST00000306256 LMX1AQ8TE12 382 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 ASB12Q8WXK4 309 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 CENPTQ96BT3 561 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 ARHGEF26Q96DR7 871 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 EXOC2Q96KP1 924 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 EPAS1Q99814 870 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 WRAP53Q9BUR4 548 aaKnown RBP20.77■□□□□ 0.92
RER1-201ENST00000306256 TTYH3Q9C0H2 523 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 HSD3B7Q9H2F3 369 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 TCEAL2Q9H3H9 227 aaPredicted RBP20.77■□□□□ 0.92
RER1-201ENST00000306256 GPATCH2LQ9NWQ4 482 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 LHX3Q9UBR4 397 aa20.77■□□□□ 0.92
RER1-201ENST00000306256 ANKRD62A6NC57 917 aa20.76■□□□□ 0.91
RER1-201ENST00000306256 AQP9O43315 295 aa20.76■□□□□ 0.91
RER1-201ENST00000306256 CDK11BP21127 795 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms