RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 LINC00523Q86TU6 105 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PQLC1Q8N2U9 271 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TMA16Q96EY4 203 aaKnown RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SLC38A7Q9NVC3 462 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 VPS28Q9UK41 221 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PCDHGB4Q9UN71 923 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 DTNAQ9Y4J8 743 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PCDHGB5Q9Y5G0 923 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 KLHL33A6NCF5 533 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 MAFKO60675 156 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PAGE1O75459 146 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 HLA-DQB2P05538 268 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PPARGP37231 505 aaPredicted RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SH3BGRP55822 239 aaPredicted RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 FLOT2Q14254 428 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SH2D4BQ5SQS7 431 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 RBM20Q5T481 1227 aaKnown RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 CNSTQ6PJW8 725 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 BNC2Q6ZN30 1099 aaPredicted RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TMEM126BQ8IUX1 230 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TXNDC5Q8NBS9 432 aaKnown RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 RDH11Q8TC12 318 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 HEXDCQ8WVB3 486 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TSPAN18Q96SJ8 248 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SERPINI1Q99574 410 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 RBM22Q9NW64 420 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 GTSE1Q9NYZ3 720 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ANKRD6Q9Y2G4 727 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 AAR2Q9Y312 384 aaKnown RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PTCH2Q9Y6C5 1203 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SMIM31A0A1B0GVY4 71 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 TTC24A2A3L6 582 aaPredicted RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 CPT1AP50416 773 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 FOLH1Q04609 750 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 NSUN2Q08J23 767 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 CSHL1Q14406 222 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 MARVELD2Q8N4S9 558 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 COPG1Q9Y678 874 aaKnown RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 AK5Q9Y6K8 562 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 C15orf38-AP3S2A0A0A6YYH1 394 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 CCL22O00626 93 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 DENRO43583 198 aaKnown RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 ETS2P15036 469 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 KCNA5P22460 613 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 ARPINQ7Z6K5 226 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 SETD3Q86TU7 594 aaPredicted RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 KDM1BQ8NB78 822 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 RP9Q8TA86 221 aaKnown RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 NAT14Q8WUY8 206 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 FCRL2Q96LA5 508 aaPredicted RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 FSD1LQ9BXM9 530 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 POMKQ9H5K3 350 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 ZNF385DQ9H6B1 395 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 COPS7BQ9H9Q2 264 aaPredicted RBP15.29■□□□□ 0.04
CSDC2-201ENST00000306149 WDR41Q9HAD4 459 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 TNFRSF12AQ9NP84 129 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 SLC45A1Q9Y2W3 748 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 MYLKQ15746 1914 aa15.29■□□□□ 0.04
CSDC2-201ENST00000306149 CCNCP24863 283 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 PCSK1P29120 753 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 HADHAP40939 763 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 PRKAA2P54646 552 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 MAP2K5Q13163 448 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 ART3Q13508 389 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 UPP1Q16831 310 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 C14orf80Q86SX3 495 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 CPSF7Q8N684 471 aaKnown RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 BHLHE22Q8NFJ8 381 aaPredicted RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 OR10T2Q8NGX3 314 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 CASP10Q92851 521 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 CSNK1G1Q9HCP0 422 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 RRN3Q9NYV6 651 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 NDUFA13Q9P0J0 144 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 MTF2Q9Y483 593 aaPredicted RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 MT-CO1P00395 513 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 ITGB1P05556 798 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 HDCP19113 662 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 MAXP61244 160 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 MRPS6P82932 125 aaKnown RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 COG7P83436 770 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 PIGGQ5H8A4 983 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 IL31Q6EBC2 164 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 ZFP1Q6P2D0 407 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 GK5Q6ZS86 529 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 TRIM67Q6ZTA4 783 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 FCRL5Q96RD9 977 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 AGO3Q9H9G7 860 aaKnown RBP15.28■□□□□ 0.04
CSDC2-201ENST00000306149 TCAF1Q9Y4C2 921 aa15.28■□□□□ 0.04
CSDC2-201ENST00000306149 CACNG3O60359 315 aa15.27■□□□□ 0.04
CSDC2-201ENST00000306149 ANXA9O76027 345 aa15.27■□□□□ 0.04
CSDC2-201ENST00000306149 SMIM18P0DKX4 95 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms