RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 EPB41L4BQ9H329 900 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CLEC4AQ9UMR7 237 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LRRC14BA6NHZ5 514 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KPNA4O00629 521 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RPN2P04844 631 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TGFB3P10600 412 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 UGCGQ16739 394 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 POMZP3Q6PJE2 187 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 APTXQ7Z2E3 356 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RTL3Q8N8U3 475 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SETD9Q8NE22 299 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SLC25A23Q9BV35 468 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 STARD13Q9Y3M8 1113 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 A0A0A0MRY4 1105 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TNFRSF21O75509 655 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HIST1H2ABP04908 130 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EIF4BP23588 611 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NOS2P35228 1153 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KCNJ2P63252 427 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SPANXN2Q5MJ10 180 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SPESP1Q6UW49 350 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KIAA0408Q6ZU52 694 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HIST3H2AQ7L7L0 130 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CAPSLQ8WWF8 208 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HIST1H2ACQ93077 130 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FEM1CQ96JP0 617 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SPATA13Q96N96 652 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ABHD16BQ9H3Z7 469 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IKZF3Q9UKT9 509 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TRAV19A0A0A6YYK7 116 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FFAR2O15552 330 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ANXA5P08758 320 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EPHA3P29320 983 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PPIL2Q13356 520 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CERS2Q96G23 380 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KLHL5Q96PQ7 755 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF222Q9UK12 451 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PRG2P13727 222 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RPL7AP62424 266 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KLHL12Q53G59 568 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KYAT3Q6YP21 454 aaKnown RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR4A15Q8NGL6 344 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PLEKHG4BQ96PX9 1271 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VAV3Q9UKW4 847 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EFR3BQ9Y2G0 817 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SIGLEC16A6NMB1 481 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CHADO15335 359 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PSMD7P51665 324 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RHAGQ02094 409 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF697Q5TEC3 545 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 APBB2Q92870 758 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NPAS2Q99743 824 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ABCB10Q9NRK6 738 aa13.68□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SCAMP1O15126 338 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DSELQ8IZU8 1212 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR5B17Q8NGF7 314 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TP53INP1Q96A56 240 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IL22Q9GZX6 179 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SNX6Q9UNH7 406 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 POLR3HQ9Y535 204 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PXDNQ92626 1479 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PIK3C2BO00750 1634 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 A0A1W2PPM1 405 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KHDRBS3O75525 346 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM155BO75949 473 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HDCP19113 662 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CD52P31358 61 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ADARP55265 1226 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TAS2R40P59535 323 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NDUFAF6Q330K2 333 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RAD51AP1Q96B01 352 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VCPIP1Q96JH7 1222 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NUAK2Q9H093 628 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FANCEQ9HB96 536 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GMPPBQ9Y5P6 360 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KRT33AO76009 404 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ATP5BP06576 529 aaKnown RBP13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ANXA6P08133 673 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MYBL2P10244 700 aa13.67□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AXLP30530 894 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms