RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 ZDHHC4Q9NPG8 344 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 NCKIPSDQ9NZQ3 722 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 TEX28O15482 410 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 ITGA2BP08514 1039 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 MLLT6P55198 1093 aaPredicted RBP10.28□□□□□ -0.76
GABRB3-201ENST00000299267 SEC13P55735 322 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 PTP4A2Q12974 167 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 MAP7Q14244 749 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 MPPE1Q53F39 396 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 RNASEH2BQ5TBB1 312 aaKnown RBP10.28□□□□□ -0.76
GABRB3-201ENST00000299267 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 CNSTQ6PJW8 725 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 SCIMPQ6UWF3 145 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 RGS9BPQ6ZS82 235 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 CHST9Q7L1S5 443 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 MAGEB18Q96M61 343 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 NPY6RQ99463 290 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 ACSS3Q9H6R3 686 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 SPASTQ9UBP0 616 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 PCDHGB4Q9UN71 923 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 BCLAF3A2AJT9 711 aaKnown RBP10.28□□□□□ -0.76
GABRB3-201ENST00000299267 CCT8L1PA6NM43 557 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 SOD2P04179 222 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 AIF1P55008 147 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 NCBP2-AS2Q69YL0 99 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 RAET1GQ6H3X3 334 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 TAS1R1Q7RTX1 841 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 QKIQ96PU8 341 aaKnown RBP eCLIP10.28□□□□□ -0.76
GABRB3-201ENST00000299267 SLC7A5P2Q9GIP4 190 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 GRHL1Q9NZI5 618 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 INSL5Q9Y5Q6 135 aa10.28□□□□□ -0.76
GABRB3-201ENST00000299267 CARNS1A5YM72 827 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 TRIM13O60858 407 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 EPB42P16452 691 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 LPOP22079 712 aaPredicted RBP10.27□□□□□ -0.76
GABRB3-201ENST00000299267 CDH13P55290 713 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 MTA1Q13330 715 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 ARHGAP36Q6ZRI8 547 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 RGL4Q8IZJ4 473 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 ZNF75CPQ92670 426 aaPredicted RBP10.27□□□□□ -0.76
GABRB3-201ENST00000299267 APOPT1Q96IL0 206 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.76
GABRB3-201ENST00000299267 CAPN10Q9HC96 672 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 TLR9Q9NR96 1032 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.76
GABRB3-201ENST00000299267 PCDHA11Q9Y5I1 949 aa10.27□□□□□ -0.76
GABRB3-201ENST00000299267 STAU1O95793 577 aaKnown RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 RBP1P09455 135 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CLNS1AP54105 237 aaKnown RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 USP46P62068 366 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 PLCL1Q15111 1095 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 ADGRF1Q5T601 910 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 FBXW10Q5XX13 1052 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CAMK1DQ8IU85 385 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 MPP5Q8N3R9 675 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 FBXO39Q8N4B4 442 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 RAB42Q8N4Z0 105 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SLC35B2Q8TB61 432 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SDCCAG3Q96C92 435 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SLC9A7Q96T83 725 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 WRAP53Q9BUR4 548 aaKnown RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 PIF1Q9H611 641 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 VRTNQ9H8Y1 702 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SEMA4BQ9NPR2 832 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SLC17A7Q9P2U7 560 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 NDRG2Q9UN36 371 aaKnown RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 AURKCQ9UQB9 309 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 GRXCR1A8MXD5 290 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TPBGLP0DKB5 382 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 HAPLN1P10915 354 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 NMBRP28336 390 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CTGFP29279 349 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 MC4RP32245 332 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SLC8A1P32418 973 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CACNA2D1P54289 1103 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 YBEYP58557 167 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TEAD2Q15562 447 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TBCCQ15814 346 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 ALFQ53S48 1182 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TPGS2Q68CL5 300 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 DSG4Q86SJ6 1040 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 LRRC49Q8IUZ0 686 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 KCTD13Q8WZ19 329 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 SEZ6LQ9BYH1 1024 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 MIR1-1HGQ9H1L0 117 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TLR6Q9Y2C9 796 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 MATN3O15232 486 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 TFEBP19484 476 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CSKP41240 450 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 MPP1Q00013 466 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 PARP15Q460N3 678 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 DENND6AQ8IWF6 608 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 DCBLD1Q8N8Z6 715 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.77
GABRB3-201ENST00000299267 KLK6Q92876 244 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms