RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 H3BMQ9 156 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 E2F6O75461 281 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 FAM163BP0C2L3 166 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 YWHAQP27348 245 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 OXCT1P55809 520 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 SOWAHAQ2M3V2 549 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 RWDD4Q6NW29 188 aaKnown RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF354CQ86Y25 554 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 RSPH1Q8WYR4 309 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 FAM167AQ96KS9 214 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 COG8Q96MW5 612 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 MED10Q9BTT4 135 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF229Q9UJW7 825 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 WNK3Q9BYP7 1800 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 CITO14578 2027 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 HCRTO43612 131 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 BMP10O95393 424 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 NFKB1P19838 968 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 JAK1P23458 1154 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 ADSLP30566 484 aaPredicted RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 BMXP51813 675 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 C1QTNF12Q5T7M4 302 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 CYS1Q717R9 158 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 ERO1BQ86YB8 467 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 SLC7A14Q8TBB6 771 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 DNAJB14Q8TBM8 379 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 FAM110BQ8TC76 370 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 HPS1Q92902 700 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 MINDY3Q9H8M7 445 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 FBRSL1Q9HCM7 1045 aaKnown RBP11.52□□□□□ -0.57
TRUB1-201ENST00000298746 DSEQ9UL01 958 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 KIAA1257Q9ULG3 409 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 TLL2Q9Y6L7 1015 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 TRIP11Q15643 1979 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 NUP205Q92621 2012 aa11.52□□□□□ -0.57
TRUB1-201ENST00000298746 A0A087WZ62 844 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM247A6NEH6 219 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TOR1BO14657 336 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SLC4A1P02730 911 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 CD247P20963 164 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TTKP33981 857 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 HOXD12P35452 270 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 CDH13P55290 713 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 PLIN5Q00G26 463 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 IL1RL1Q01638 556 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SPIDRQ14159 915 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SQLEQ14534 574 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 HERC3Q15034 1050 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 CARTPTQ16568 116 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 UGP2Q16851 508 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF280DQ6N043 979 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 NANOGNBQ7Z5D8 188 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ANKRD52Q8NB46 1076 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TAMM41Q96BW9 452 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 FDXACB1Q9BRP7 624 aaPredicted RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 CDHR5Q9HBB8 845 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ATAD3AQ9NVI7 634 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 MTMR10Q9NXD2 777 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SDHDO14521 159 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 PMPCBO75439 489 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 FUCA1P04066 466 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 RAD23AP54725 363 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 VPS26BQ4G0F5 336 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF470Q6ECI4 717 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ALDH16A1Q8IZ83 802 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 PARP8Q8N3A8 854 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 RANBP9Q96S59 729 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 RPF2Q9H7B2 306 aaKnown RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SPTLC1O15269 473 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TOMM70O94826 608 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 ATICP31939 592 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 C6orf183Q5T699 404 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 RNF145Q96MT1 663 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SPATA33Q96N06 139 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 FTHL17Q9BXU8 183 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SIK2Q9H0K1 926 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 RHOJQ9H4E5 214 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 INIPQ9NRY2 104 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SLC38A7Q9NVC3 462 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 CNOT11Q9UKZ1 510 aaKnown RBP11.51□□□□□ -0.57
TRUB1-201ENST00000298746 STAP1Q9ULZ2 295 aa11.51□□□□□ -0.57
TRUB1-201ENST00000298746 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PTGES3LE9PB15 166 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms