RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MEIOBQ8N635 442 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 UBE2E3Q969T4 207 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 ELOVL4Q9GZR5 314 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 EPB41L1Q9H4G0 881 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 A0A075B6Q4 140 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 CES2O00748 559 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 XKRYO14609 159 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 LDLRP01130 860 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 ANTXR2P58335 489 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 MBTD1Q05BQ5 628 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 GXYLT1Q4G148 440 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 RDH8Q9NYR8 311 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 ING4Q9UNL4 249 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 NR2F1P10589 423 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 RRM1P23921 792 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 DGUOKQ16854 277 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 GJB7Q6PEY0 223 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 LRRC69Q6ZNQ3 347 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 EPS8L3Q8TE67 593 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 ARMCX1Q9P291 453 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 TNFAIP8O95379 198 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 RPA3P35244 121 aaPredicted RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 TUFMP49411 452 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 GRB10Q13322 594 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 DNAJC14Q6Y2X3 702 aaPredicted RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 COG5Q9UP83 839 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CXCR2P25025 360 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 MAPK10P53779 464 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CERCAMQ5T4B2 595 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 LENG9Q96B70 501 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 PPP1R16AQ96I34 528 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 FERD3LQ96RJ6 166 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 GULP1Q9UBP9 304 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 SAMD4AQ9UPU9 718 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 KERAO60938 352 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 MSR1P21757 451 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 MSX1P28360 303 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 GIT2Q14161 759 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 LNX2Q8N448 690 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 ACTL9Q8TC94 416 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 MTG1Q9BT17 334 aaPredicted RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 TMEM121Q9BTD3 319 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 DGCR6LQ9BY27 220 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 LMAN2LQ9H0V9 348 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 FAM58BPP0C7Q3 252 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 ANPEPP15144 967 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 RFX4Q33E94 735 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 IRGCQ6NXR0 463 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 HCAR2Q8TDS4 363 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 TEKT5Q96M29 485 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 DMTF1Q9Y222 760 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CDC42BPAQ5VT25 1732 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 H3BRB1 525 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 SGTAO43765 313 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 KLHL41O60662 606 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 OR1E1P30953 314 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 PTENP60484 403 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CBX3Q13185 183 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 INTS11Q5TA45 600 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 ERICH5Q6P6B1 374 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 CCDC36Q8IYA8 594 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 ACSF2Q96CM8 615 aaPredicted RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 ZDHHC6Q9H6R6 413 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 SCTRP47872 440 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 PTPN5P54829 565 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 SAMD4BQ5PRF9 694 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 TSEN15Q8WW01 171 aaKnown RBP12.16□□□□□ -0.46
PCF11-201ENST00000298281 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 OSBPL11Q9BXB4 747 aa12.16□□□□□ -0.46
PCF11-201ENST00000298281 SLC37A4O43826 429 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 LDOC1O95751 146 aaPredicted RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 PGAM1P18669 254 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 TFAP2DQ7Z6R9 452 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 FAM126BQ8IXS8 530 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 DHRSXQ8N5I4 330 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 METTL21AQ8WXB1 218 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 REEP1Q9H902 201 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 DMGDHQ9UI17 866 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 GCATO75600 419 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms