RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 CASS4Q9NQ75 786 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 TRIP11Q15643 1979 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 SNRPB2P08579 225 aaKnown RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 CD68P34810 354 aaPredicted RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 VGLL4Q14135 290 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 NEDD8Q15843 81 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 UGP2Q16851 508 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ZNF484Q5JVG2 852 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 GPR107Q5VW38 600 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 DDIASQ8IXT1 998 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 OFCC1Q8IZS5 231 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 CENPLQ8N0S6 344 aaPredicted RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 RDH11Q8TC12 318 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 STYXQ8WUJ0 223 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 TNIP3Q96KP6 325 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ZNF487B1APH4 448 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 NOL3O60936 208 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 PGK1P00558 417 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 MT-ND1P03886 318 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 USP17L7P0C7H9 530 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CYP2B6P20813 491 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 EDNRBP24530 442 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 SLC26A2P50443 739 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 C16orf87Q6PH81 154 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 ARMCX2Q7L311 632 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 UNC93AQ86WB7 457 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 SPPL2CQ8IUH8 684 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 ERI1Q8IV48 349 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 CHERPQ8IWX8 916 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 KDM1BQ8NB78 822 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 PPHLN1Q8NEY8 458 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 GIPC3Q8TF64 312 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 GBA3Q9H227 469 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CACNA2D2Q9NY47 1150 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CACNG4Q9UBN1 327 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 GNAO1P09471 354 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CCR3P51677 355 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 SLC5A3P53794 718 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CDH13P55290 713 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 NAA20P61599 178 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 RHDQ02161 417 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 DPYSQ14117 519 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CAPRIN1Q14444 709 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 GIMAP2Q9UG22 337 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 PIN4Q9Y237 131 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 SPTLC1O15269 473 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 HTRA2O43464 458 aaPredicted RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 SBK3P0C264 359 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CDK9P50750 372 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 ZNF280AP59817 542 aaPredicted RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 SLC44A4Q53GD3 710 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 DALRD3Q5D0E6 543 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 PATL1Q86TB9 770 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 ZNF554Q86TJ5 538 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CPSF7Q8N684 471 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 OR6P1Q8NGX9 317 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 TRPM4Q8TD43 1214 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 RCOR3Q9P2K3 495 aaPredicted RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 DSEQ9UL01 958 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 SOCS2O14508 198 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 NRP1O14786 923 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 GRM5P41594 1212 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 HABP4Q5JVS0 413 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 ARHGAP17Q68EM7 881 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CHSY3Q70JA7 882 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CUZD1Q86UP6 607 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CPNE9Q8IYJ1 553 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 WDCPQ9H6R7 721 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 EML4Q9HC35 981 aaKnown RBP14.85□□□□□ -0.03
CCNF-201ENST00000293968 OR12D3Q9UGF7 316 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CDC14AQ9UNH5 594 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
CCNF-201ENST00000293968 H3BNH8 94 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 DAB1O75553 588 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 ARL1P40616 181 aaPredicted RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 MAGEA12P43365 314 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 HERC3Q15034 1050 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 FUT11Q495W5 492 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 SAMD4BQ5PRF9 694 aaKnown RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 TICAM1Q8IUC6 712 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 B3GALNT2Q8NCR0 500 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 CIDEBQ9UHD4 219 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 CCL22O00626 93 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 CRCPO75575 148 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 GABRB3P28472 473 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 KPNA2P52292 529 aaKnown RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 C1QTNF8P60827 252 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 CCNA1P78396 465 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 ATP1A4Q13733 1029 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 LDB1Q86U70 411 aaPredicted RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 C11orf84Q9BUA3 381 aaPredicted RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 TKTL2Q9H0I9 626 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms