RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NRP2O60462 931 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 ZC3H12AQ5D1E8 599 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 PHF11Q9UIL8 331 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 GPSM3Q9Y4H4 160 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 U3KQV3 271 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 SF3B1O75533 1304 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 NTSP30990 170 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 C5orf22Q49AR2 442 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 ZNF549Q6P9A3 640 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 CKAP2Q8WWK9 683 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RAD51AP1Q96B01 352 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 ABCB9Q9NP78 766 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 PNPOQ9NVS9 261 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 STOML2Q9UJZ1 356 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 POLR3HQ9Y535 204 aaPredicted RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 FOXO6A8MYZ6 492 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RGL2O15211 777 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 GAS2O43903 313 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 SNRPB2P08579 225 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 INSRRP14616 1297 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 PSME3P61289 254 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RPTNQ6XPR3 784 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 TMCC2O75069 709 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 SLITRK3O94933 977 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PTPN3P26045 913 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 NR2C2P49116 596 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 SFSWAPQ12872 951 aaKnown RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 ABRQ12979 859 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 FAM131AQ6UXB0 335 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PNPT1Q8TCS8 783 aaKnown RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 FAM126AQ9BYI3 521 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PRDM4Q9UKN5 801 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 IGSF6O95976 241 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 CTPS1P17812 591 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 EPHA3P29320 983 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 ADSSP30520 456 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 OR52L1Q8NGH7 329 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 NELL1Q92832 810 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 APBB2Q92870 758 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 UBA2Q9UBT2 640 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 OR5F1O95221 314 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 TNK2Q07912 1038 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 GK5Q6ZS86 529 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 C2orf73Q8N5S3 287 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 SMYD1Q8NB12 490 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 RELTQ969Z4 430 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 FEM1CQ96JP0 617 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 SPAG4Q9NPE6 437 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 GPC6Q9Y625 555 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 NCAM2O15394 837 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 HIST1H2ABP04908 130 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 ALDH2P05091 517 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 CLUP10909 449 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 MARCKSL1P49006 195 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 SEPHS1P49903 392 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PSMD4P55036 377 aaKnown RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PEX6Q13608 980 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 C6orf52Q5T4I8 152 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 UNC5AQ6ZN44 842 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 HIST3H2AQ7L7L0 130 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 CLHC1Q8NHS4 586 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 HIST1H2ACQ93077 130 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 ZHX1-C8orf76Q96EF9 292 aa16.25■□□□□ 0.19
SSRP1-202ENST00000293880 MTIF3Q9H2K0 278 aaKnown RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 CHMP1AQ9HD42 196 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-202ENST00000293880 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RXRGP48443 463 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 SOHLH2Q9NX45 425 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ZNHIT2Q9UHR6 403 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ATP6AP2A0A1C7CYW4 349 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 A0A1W2PPM1 405 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ATP6AP2O75787 350 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RCVRNP35243 200 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 HSPA14Q0VDF9 509 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 TMEM110Q86TL2 294 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 VANGL1Q8TAA9 524 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 HDAC2Q92769 488 aaKnown RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ART5Q96L15 291 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CRNNQ9UBG3 495 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RAB21Q9UL25 225 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CCDC189A1A4V9 331 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 OMPP47874 163 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 TOP3AQ13472 1001 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 KYAT3Q6YP21 454 aaKnown RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CLIP4Q8N3C7 705 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 PHC3Q8NDX5 983 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms