RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TBC1D13Q9NVG8 400 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CLIC5Q9NZA1 410 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 PIPSLA2A3N6 862 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CSPG5O95196 566 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ANPEPP15144 967 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ACO1P21399 889 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 HARS2P49590 506 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 RABGGTBP53611 331 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 SLC16A1P53985 500 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 AMPD2Q01433 879 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ACOT1Q86TX2 421 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CDT1Q9H211 546 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 STN1Q9H668 368 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ASB7Q9H672 318 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 PNMA8BQ9ULN7 279 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 DUSP12Q9UNI6 340 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 PRR23AA6NEV1 266 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 TAF4O00268 1085 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 C2CD2LO14523 706 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ANXA6P08133 673 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 MZF1P28698 734 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ANKS6Q68DC2 871 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ARCQ7LC44 396 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 KCNMB4Q86W47 210 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 FICDQ9BVA6 458 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 CLPBQ9H078 707 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 SERHL2Q9H4I8 314 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 PDZD7Q9H5P4 517 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 SERHLQ9NQF3 203 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 RSL24D1Q9UHA3 163 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 A0A087X0B3 334 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM220BPB1ANY3 271 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 H7C4K7 107 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 TULP2O00295 520 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 B4GALT5O43286 388 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 MT-CO1P00395 513 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 SCNN1GP51170 649 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM192Q8IY95 271 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 C8orf59Q8N0T1 100 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 SFRP1Q8N474 314 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM45AQ8TCE6 357 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 LPPQ93052 612 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 GORASP1Q9BQQ3 440 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ELOVL6Q9H5J4 265 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ATXN10Q9UBB4 475 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 ANAPC2Q9UJX6 822 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 TRHDEQ9UKU6 1024 aa11.96□□□□□ -0.49
SYNGAP1-201ENST00000293748 MGAT4DA6NG13 374 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 HS6ST1O60243 411 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 SHBGP04278 402 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 CYP1A1P04798 512 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FOSL2P15408 326 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 AKAP5P24588 427 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 ITGB8P26012 769 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 RPL14P50914 215 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 MYL6P60660 151 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 NFIL3Q16649 462 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 DUPD1Q68J44 220 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 AMER2Q8N7J2 671 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 BHLHE22Q8NFJ8 381 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 ACTRT2Q8TDY3 377 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 UTP15Q8TED0 518 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 HTR3CQ8WXA8 447 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FIG4Q92562 907 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 HACD1B0YJ81 288 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM25AB3EWG3 89 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM25CB3EWG5 89 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM25GB3EWG6 89 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 PTGES3LE9PB15 166 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 FGFR1P11362 822 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 MMP13P45452 471 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 TUSC3Q13454 348 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 CYP4Z2PQ8N1L4 340 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 RERGLQ9H628 205 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 CCDC167Q9P0B6 97 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.5
SYNGAP1-201ENST00000293748 TK2O00142 265 aa11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 PGM3O95394 542 aa11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 ABCB1P08183 1280 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 ITGALP20701 1170 aa11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 ARSHQ5FYA8 562 aa11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 KHDRBS2Q5VWX1 349 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZCCHC23Q6ZST2 131 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms