RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NPEPPSL1A6NEC2 478 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 MANSC4A6NHS7 340 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 GJA1P17302 382 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 POU1F1P28069 291 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 L1CAMP32004 1257 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 WNT3AP56704 352 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SLC25A11Q02978 314 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 CDC16Q13042 620 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 RNF43Q68DV7 783 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 TMCO2Q7Z6W1 182 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM13CQ8NE31 585 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FBXO30Q8TB52 745 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PSMG2Q969U7 264 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FBXO44Q9H4M3 255 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 AGO3Q9H9G7 860 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 WDR41Q9HAD4 459 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 TBC1D13Q9NVG8 400 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.83□□□□□ -1.64
UBR1-201ENST00000290650 UBA2Q9UBT2 640 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 MORF4L1Q9UBU8 362 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SLC25A13Q9UJS0 675 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 CDH9Q9ULB4 789 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 STRCQ7RTU9 1775 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 DOCK2Q92608 1830 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PTGES3LE9PB15 166 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 CRTAMO95727 393 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 ICAM3P32942 547 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 HNF4AP41235 474 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PFKPQ01813 784 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 CRHR2Q13324 411 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PPM1LQ5SGD2 360 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FSTL4Q6MZW2 842 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 ZBTB49Q6ZSB9 765 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 OTOP2Q7RTS6 562 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM228AQ86W67 206 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 UNC93AQ86WB7 457 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 MRPS31Q92665 395 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 SPATA16Q9BXB7 569 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FRMD8Q9BZ67 464 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 SYNDIG1Q9H7V2 258 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SH3BP4Q9P0V3 963 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SLC2A6Q9UGQ3 507 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 E9PAM4 449 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SYNCRIPO60506 623 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 HNRNPCL1O60812 293 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 SEC22BO75396 215 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 NTRK1P04629 796 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 COX4I1P13073 169 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 RPL14P50914 215 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 PTPRNQ16849 979 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 SLC30A9Q6PML9 568 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 OSTM1Q86WC4 334 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 YAF2Q8IY57 180 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 NRBF2Q96F24 287 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 NAT9Q9BTE0 207 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FZD8Q9H461 694 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PCDHGC3Q9UN70 934 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PCDHGB4Q9UN71 923 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 COQ4Q9Y3A0 265 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 HBS1LQ9Y450 684 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 F8W810 466 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM72CH0Y354 149 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 MRASO14807 208 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 LZTS3O60299 673 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 TPBGLP0DKB5 382 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 GRK2P25098 689 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PSMA4P25789 261 aaKnown RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 EPHB3P54753 998 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 TRIM32Q13049 653 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM72AQ5TYM5 149 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM72DQ6L9T8 149 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 HORMAD1Q86X24 394 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FAM72BQ86X60 149 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 SEPT8Q92599 483 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 THAP11Q96EK4 314 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 FTHL17Q9BXU8 183 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 ADGRE3Q9BY15 652 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 ASPSCR1Q9BZE9 553 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 DENND2DQ9H6A0 471 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 ARMC7Q9H6L4 198 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 HMX1Q9NP08 348 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 VPS45Q9NRW7 570 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 PKD2L2Q9NZM6 624 aa4.83□□□□□ -1.64
UBR1-201ENST00000290650 NKX1-2Q9UD57 310 aaPredicted RBP4.83□□□□□ -1.64
UBR1-201ENST00000290650 A0A0U1RQS6 177 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 CCDC154A6NI56 674 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 HACD1B0YJ81 288 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 BPGMP07738 259 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 DDX5P17844 614 aaKnown RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 CES1P23141 567 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 CNTFP26441 200 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 AXLP30530 894 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 ATP5C1P36542 298 aaKnown RBP4.82□□□□□ -1.64
UBR1-201ENST00000290650 CASP9P55211 416 aa4.82□□□□□ -1.64
UBR1-201ENST00000290650 RAB10P61026 200 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms