RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SMOC2Q9H3U7 446 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RIBC2Q9H4K1 309 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 DDX4Q9NQI0 724 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLC6A13Q9NSD5 602 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 IARS2Q9NSE4 1012 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 TMEM59LQ9UK28 342 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CCPG1Q9ULG6 757 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 VPS4AQ9UN37 437 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 COPG1Q9Y678 874 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 PASKQ96RG2 1323 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ROCK2O75116 1388 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 WNK3Q9BYP7 1800 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NFAT5O94916 1531 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 NKX2-8O15522 239 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TADA2AO75478 443 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ZWINTO95229 277 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TPBGLP0DKB5 382 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TFPIP10646 304 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ACTN1P12814 892 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PEPDP12955 493 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NID1P14543 1247 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 STX1BP61266 288 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 IL13RA2Q14627 380 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 KARSQ15046 597 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 HIST2H2ACQ16777 129 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ST3GAL2Q16842 350 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 EMC4Q5J8M3 183 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 KCTD9Q7L273 389 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ZNF572Q7Z3I7 529 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 LINC00346Q8IVM7 164 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PDPRQ8NCN5 879 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLC22A18Q96BI1 424 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM111AQ96PZ2 611 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TCF25Q9BQ70 676 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CADM1Q9BY67 442 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 JKAMPQ9P055 326 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 HCN3Q9P1Z3 774 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FBXL17Q9UF56 701 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NPHP4O75161 1426 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 PXDNQ92626 1479 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 DENND3A2RUS2 1198 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 E2F3O00716 465 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TLR2O60603 784 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RLN1P04808 185 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MMP2P08253 660 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PKMP14618 531 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 BSGP35613 385 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 HAND2P61296 217 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ATP2C1P98194 919 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ZMYND11Q15326 602 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 XKR9Q5GH70 373 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 LDLRAP1Q5SW96 308 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TATDN1Q6P1N9 297 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MFSD7Q6UXD7 560 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ZBTB49Q6ZSB9 765 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM20CQ8IXL6 584 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FBXO39Q8N4B4 442 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 Q8NFD4 153 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NCOA7Q8NI08 942 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PTP4A1Q93096 173 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 VWCEQ96DN2 955 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FBXL20Q96IG2 436 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLX1AQ9BQ83 275 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 POLR3CQ9BUI4 534 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 PITHD1Q9GZP4 211 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 SNX25Q9H3E2 840 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TOR3AQ9H497 397 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 C19orf44Q9H6X5 657 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 C1GALT1Q9NS00 363 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 LMCD1Q9NZU5 365 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TNFSF13BQ9Y275 285 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLC27A6Q9Y2P4 619 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 GAGE10A6NGK3 116 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 AGAP14A8MT82 685 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TPPPO94811 219 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SEC24DO94855 1032 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 AVPP01185 164 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 C8orf89P0DMQ9 161 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 BCRP11274 1271 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 EPORP19235 508 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 SFPQP23246 707 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD1-201ENST00000284049 IL4RP24394 825 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PSMA5P28066 241 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SLC16A2P36021 539 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 VIPR2P41587 438 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TRPC1P48995 793 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RAD23AP54725 363 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 EFNB1P98172 346 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 GRSF1Q12849 480 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD1-201ENST00000284049 BNIP3Q12983 259 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 KCTD21Q4G0X4 260 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 FILIP1LQ4L180 1135 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MCTP1Q6DN14 999 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 CLEC10AQ8IUN9 316 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ARHGAP45Q92619 1136 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TEKT1Q969V4 418 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TESK2Q96S53 571 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms