RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PDLIM2Q96JY6 352 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 C5orf34Q96MH7 638 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MRPL57Q9BQC6 102 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FNDC11Q9BVV2 318 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZYG11BQ9C0D3 744 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CYP4F12Q9HCS2 524 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 EPB41L4AQ9HCS5 686 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GMIPQ9P107 970 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 LRCH1Q9Y2L9 728 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GIT1Q9Y2X7 761 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 COL1A2P08123 1366 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 C1orf232A0A0U1RR37 186 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FGBP02675 491 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IDO1P14902 403 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 HSD17B3P37058 310 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IL12RB1P42701 662 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CDH8P55286 799 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RASGEF1BQ0VAM2 473 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 WDR93Q6P2C0 686 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ARCQ7LC44 396 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CACUL1Q86Y37 369 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TMPRSS6Q8IU80 811 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 KATNAL2Q8IYT4 538 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ACER1Q8TDN7 264 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 EDEM1Q92611 657 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ACDQ96AP0 544 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PNMA5Q96PV4 448 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IL12RB2Q99665 862 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RIOX1Q9H6W3 641 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PLEKHA1Q9HB21 404 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ELL3Q9HB65 397 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 LEF1Q9UJU2 399 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 VPS4AQ9UN37 437 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SCN2BO60939 215 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GATBO75879 557 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RGS20O76081 388 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 KLHL18O94889 574 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CYP3A4P08684 503 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FDPSP14324 419 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 HOXA10P31260 410 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PNLIPRP1P54315 467 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PFKPQ01813 784 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TOP3AQ13472 1001 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 XKR4Q5GH76 650 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 NOMO2Q5JPE7 1267 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 BRMS1LQ5PSV4 323 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DEFB107AQ8IZN7 70 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ACMSDQ8TDX5 336 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SLC5A5Q92911 643 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 OXNAD1Q96HP4 312 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CELF6Q96J87 481 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF514Q96K75 400 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RNF145Q96MT1 663 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 APOL2Q9BQE5 337 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF670Q9BS34 389 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 COPS7AQ9UBW8 275 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 LIMD1Q9UGP4 676 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MYRFQ9Y2G1 1151 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PCDHGB1Q9Y5G3 927 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 A0A0J9YVX5 310 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FAM205CA6NFA0 338 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 EFCAB10A6NFE3 127 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 INPP4BO15327 924 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TLL1O43897 1013 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GLI1P08151 1106 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 NR2F6P10588 404 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 NOS2P35228 1153 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SOX11P35716 441 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CRATP43155 626 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF143P52747 638 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 UGT2B15P54855 530 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CDH4P55283 916 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ANTXR2P58335 489 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 OLR1P78380 273 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RRP1BQ14684 758 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MYBPC3Q14896 1274 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FUT11Q495W5 492 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PLEKHA7Q6IQ23 1121 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 VSTM1Q6UX27 236 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IFNLR1Q8IU57 520 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RIOX2Q8IUF8 465 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJB3Q8WWF6 145 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF606Q8WXB4 792 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MCRS1Q96EZ8 462 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CDCA5Q96FF9 252 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MTMR9Q96QG7 549 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GAD1Q99259 594 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GPR20Q99678 358 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MUC13Q9H3R2 512 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IGFLR1Q9H665 355 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IL1RAPQ9NPH3 570 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CRTAC1Q9NQ79 661 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJC11Q9NVH1 559 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 A0A0X1KG70 313 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TRIM43BA6NCK2 446 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GRM6O15303 877 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GNSP15586 552 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 GSTM5P46439 218 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms