RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RBM22Q9NW64 420 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■■■□ 26.3
NIPBL-201ENST00000282516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.81□□□□□ -1
NIPBL-201ENST00000282516 PLCL2Q9UPR0 1127 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 SLC28A1O00337 649 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 MT-CO1P00395 513 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ZNF806P0C7X5 589 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 MAPK8P45983 427 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 IL18R1Q13478 541 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 DENND6BQ8NEG7 585 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 CDADC1Q9BWV3 514 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 DMTF1Q9Y222 760 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RIIAD1A6NNX1 92 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 REM1O75628 298 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PROSCO94903 275 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 BUD31P41223 144 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 PLET1Q6UQ28 207 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ADCY10Q96PN6 1610 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 GCATO75600 419 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 CTSEP14091 401 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ELK3P41970 407 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PDK3Q15120 406 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 USF2Q15853 346 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 ARMC12Q5T9G4 340 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 FAM131AQ6UXB0 335 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 GCNT7Q6ZNI0 430 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TTC7BQ86TV6 843 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SPATA9Q9BWV2 254 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 RPS6KA4O75676 772 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 NR2F6P10588 404 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 RRM1P23921 792 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 MEA1Q16626 185 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SNX20Q7Z614 316 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 CYP4X1Q8N118 509 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 FAM81AQ8TBF8 368 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 CSGALNACT1Q8TDX6 532 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 EFHD2Q96C19 240 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 GMCL1Q96IK5 515 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 VAT1Q99536 393 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ATP13A1Q9HD20 1204 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 KANSL3Q9P2N6 904 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 LSM1O15116 133 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 ZBTB22O15209 634 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SLC6A2P23975 617 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PTGS2P35354 604 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 EIF5AP63241 154 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 TSGA10IPQ3SY00 556 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 WDR59Q6PJI9 974 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SP8Q8IXZ3 490 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SH2D3AQ9BRG2 576 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 CLK4Q9HAZ1 481 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 TRDMT1O14717 391 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 CCNDBP1O95273 360 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 FMO4P31512 558 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 FAM131BQ86XD5 332 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TMC8Q8IU68 726 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 NKAPQ8N5F7 415 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 ZNF548Q8NEK5 533 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 VPS45Q9NRW7 570 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 KLK14Q9P0G3 267 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 NYAP2Q9P242 653 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 MAGEA12P43365 314 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TUBP50607 506 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PTPN11Q06124 597 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 FNBP1LQ5T0N5 605 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ELMO1Q92556 727 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 MRPS33Q9Y291 106 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 GNB5O14775 395 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 NOS1APO75052 506 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 NPR2P20594 1047 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 KCNA5P22460 613 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 TCP10LQ8TDR4 215 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ZDHHC15Q96MV8 337 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 IL22Q9GZX6 179 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 HACL1Q9UJ83 578 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ZNRF3Q9ULT6 936 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TMEM5Q9Y2B1 443 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TFECO14948 347 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 NDUFS2O75306 463 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PROCP04070 461 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 IDO1P14902 403 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TTPAP49638 278 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 TKTL1P51854 596 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 GTF2A2P52657 109 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PKNOX1P55347 436 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 LCN1P1Q5VSP4 162 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 PAPD7Q5XG87 772 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 CITED4Q96RK1 184 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 GPN3Q9UHW5 284 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 C10orf107Q8IVU9 208 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ZCCHC9Q8N567 271 aaKnown RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 SELENOMQ8WWX9 145 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 FCRL4Q96PJ5 515 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 RNPEPL1Q9HAU8 725 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 ZNF224Q9NZL3 707 aa8.8□□□□□ -1
NIPBL-201ENST00000282516 MTF2Q9Y483 593 aaPredicted RBP8.8□□□□□ -1
NIPBL-201ENST00000282516 ERVK-7P63135 1459 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms