RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 MFSD4BQ5TF39 518 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
SCLT1-201ENST00000281142 FAM131BQ86XD5 332 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 TMEM151AQ8N4L1 468 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 CCNYQ8ND76 341 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 RMND5BQ96G75 393 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-201ENST00000281142 HPDLQ96IR7 371 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 CPNE1Q99829 537 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 OMDQ99983 421 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCLT1-201ENST00000281142 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 SUN2Q9UH99 717 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 MYRFQ9Y2G1 1151 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 RAP2CQ9Y3L5 183 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 PCDHGA7Q9Y5G6 932 aa11.49□□□□□ -0.57
SCLT1-201ENST00000281142 TMEM114B3SHH9 223 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SOCS2O14508 198 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 NRP1O14786 923 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CLIC3O95833 236 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 POLBP06746 335 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 TPH1P17752 444 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PROZP22891 400 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PSME3P61289 254 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PITX1P78337 314 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SURF1Q15526 300 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 DPYSL2Q16555 572 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 GRTP1Q5TC63 336 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 TMEM126BQ8IUX1 230 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 HERC6Q8IVU3 1022 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ZNF567Q8N184 647 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 HMGCLL1Q8TB92 370 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 LPGAT1Q92604 370 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 C12orf43Q96C57 262 aaKnown RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ERLEC1Q96DZ1 483 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SLC39A3Q9BRY0 314 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 OSBPL6Q9BZF3 934 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 EFCAB1Q9HAE3 211 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 DUS2Q9NX74 493 aaKnown RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 VPS28Q9UK41 221 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 KPNA7A9QM74 516 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 FBP2O00757 339 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 DPYSL4O14531 572 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ATE1O95260 518 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CCDC130P13994 396 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CD247P20963 164 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 GABRB3P28472 473 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 EFNA5P52803 228 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 MAPK10P53779 464 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CERCAMQ5T4B2 595 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 FAM160B1Q5W0V3 765 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 XKR5Q6UX68 686 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ARMCX6Q7L4S7 300 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PLPPR4Q7Z2D5 763 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CCNYL1Q8N7R7 359 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PPP1R13LQ8WUF5 828 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 KCTD4Q8WVF5 259 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 DLG3Q92796 817 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SGF29Q96ES7 293 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 SCYL1Q96KG9 808 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 KIAA1522Q9P206 1035 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-201ENST00000281142 ZNHIT2Q9UHR6 403 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 CDYLQ9Y232 598 aa11.48□□□□□ -0.57
SCLT1-201ENST00000281142 EVPLQ92817 2033 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 SAC3D1A6NKF1 404 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 ZNF839A8K0R7 811 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 TRIM38O00635 465 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 ADAM23O75077 832 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 STAG3L1P0CL83 205 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 MLNP12872 115 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CCL5P13501 91 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 SPRP35270 261 aaPredicted RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CLCN3P51790 818 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 NKX3-2P78367 333 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 GRM3Q14832 879 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CPSF7Q8N684 471 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 TBCBQ99426 244 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 NAA50Q9GZZ1 169 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 DRC3Q9H069 523 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 SMARCAD1Q9H4L7 1026 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 IARS2Q9NSE4 1012 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 TMED5Q9Y3A6 229 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 ZCWPW2A0A1B0GU75 182 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 H3BRB1 525 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms