RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 PTPN18Q99952 460 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 NOD2Q9HC29 1040 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 DDX18Q9NVP1 670 aaKnown RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 PROSCO94903 275 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 SYN1P17600 705 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ITPKAP23677 461 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 RFX4Q33E94 735 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 CPA6Q8N4T0 437 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 GAL3ST1Q99999 423 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 INMTO95050 263 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 EPHX1P07099 455 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 KCNA5P22460 613 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 WARSP23381 471 aaKnown RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 PDX1P52945 283 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ZNF280BQ86YH2 543 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 CLHC1Q8NHS4 586 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 RNF121Q9H920 327 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 MRGBPQ9NV56 204 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 URADA6NGE7 173 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 AKAP3O75969 853 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ACRP10323 421 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 FAM183BPQ6ZVS7 135 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ACTRT2Q8TDY3 377 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 KPNA5O15131 536 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 NT5EP21589 574 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 GPC2Q8N158 579 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 LMAN2LQ9H0V9 348 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 TMA7Q9Y2S6 64 aaKnown RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 OR10H3O60404 316 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 CCDC166P0CW27 439 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 SNX32Q86XE0 403 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 PHYKPLQ8IUZ5 450 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 RAVER1Q8IY67 606 aaKnown RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ABRAQ8N0Z2 381 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 KYQ8NBH2 561 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 KCT2Q8NC54 265 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 GMCL1P1Q8NEA9 526 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 DNAJB14Q8TBM8 379 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 KBTBD7Q8WVZ9 684 aa20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 RTFDC1Q9BY42 306 aaPredicted RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 INTS10Q9NVR2 710 aaKnown RBP20.5■□□□□ 0.87
CACNA1B-201ENST00000277549 ADH1CP00326 375 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ARMC3Q5W041 872 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 OFCC1Q8IZS5 231 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ZNF606Q8WXB4 792 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 FNDC11Q9BVV2 318 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ZNF214Q9UL59 606 aaPredicted RBP20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MAGEB3O15480 346 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 FDPSP14324 419 aaKnown RBP20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ATXN1P54253 815 aaKnown RBP20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 FAM91A1Q658Y4 838 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 JAZF1Q86VZ6 243 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 CDYL2Q8N8U2 506 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 KAT2AQ92830 837 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 RMND5BQ96G75 393 aaPredicted RBP20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 SLC26A2P50443 739 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 PPP2R2BQ00005 443 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 PUDPQ08623 228 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ZFPM1Q8IX07 1006 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ACSS2Q9NR19 701 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 COMMD9Q9P000 198 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 DYTNA2CJ06 578 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 WWP2O00308 870 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 NEK3P51956 506 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 WDR93Q6P2C0 686 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 GPR142Q7Z601 462 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 QRFPRQ96P65 431 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 WHRNQ9P202 907 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 LRPAP1P30533 357 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MCOLN2Q8IZK6 566 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 A0A087X1B8 175 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MAGEA13PA6NCF6 341 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MDM4O15151 490 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 MYBL2P10244 700 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 CCNG2Q16589 344 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 ING3Q9NXR8 418 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 RFX7Q2KHR2 1363 aa20.49■□□□□ 0.87
CACNA1B-201ENST00000277549 NCAM2O15394 837 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 TNFRSF21O75509 655 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 NRG1Q02297 640 aaPredicted RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 KRT74Q7RTS7 529 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 BHLHE22Q8NFJ8 381 aaPredicted RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 TCP10LQ8TDR4 215 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 FRMD8P1Q9BZ68 369 aaPredicted RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 STX16-NPEPL1H3BU86 382 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 STX16O14662 325 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 ZBTB11O95625 1053 aaPredicted RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 PGDP52209 483 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 TROAPQ12815 778 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 SAMD9LQ8IVG5 1584 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 TRMT2AQ8IZ69 625 aaKnown RBP20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 OR5T3Q8NGG3 340 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 EPB41L1Q9H4G0 881 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 A8MU76 341 aa20.48■□□□□ 0.87
CACNA1B-201ENST00000277549 NOS1APO75052 506 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms