RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SULT2A1Q06520 285 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 ZNF177Q13360 481 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-201ENST00000276585 CDO1Q16878 200 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 FAM72AQ5TYM5 149 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 FAM72DQ6L9T8 149 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 WDR59Q6PJI9 974 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 USP30Q70CQ3 517 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 SND1Q7KZF4 910 aaKnown RBP eCLIP12.55□□□□□ -0.43e-8■■■■■ 30.4
MRPS28-201ENST00000276585 STRADAQ7RTN6 431 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 FAM72BQ86X60 149 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 MMAAQ8IVH4 418 aaKnown RBP12.55□□□□□ -0.4
MRPS28-201ENST00000276585 SH2D3CQ8N5H7 860 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 CCDC185Q8N715 623 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
MRPS28-201ENST00000276585 VPS51Q9UID3 782 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 SARDHQ9UL12 918 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 HS3ST2Q9Y278 367 aa12.55□□□□□ -0.4
MRPS28-201ENST00000276585 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 A0A1W2PP55 124 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SIGLEC16A6NMB1 481 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SMTNL1A8MU46 457 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 RNF103O00237 685 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 FFAR2O15552 330 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 CCP110O43303 1012 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 CALB1P05937 261 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 RHOCP08134 193 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 THEGLP0DJG4 465 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 KRT3P12035 628 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 CKMT1AP12532 417 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 ELAVL4P26378 380 aaKnown RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SDC4P31431 198 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 ADRA1BP35368 520 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 GALCP54803 685 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 OGDHQ02218 1023 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 ELAVL3Q14576 367 aaKnown RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 NR1I3Q14994 352 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 Q6ZVU0 165 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SETD3Q86TU7 594 aaPredicted RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 NLRP14Q86W24 1093 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
MRPS28-201ENST00000276585 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 DCAF4L2Q8NA75 395 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 OR7D4Q8NG98 312 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 NDFIP2Q9NV92 336 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 SCML1Q9UN30 329 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
MRPS28-201ENST00000276585 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 K7ERQ8 282 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 SMAD6O43541 496 aaKnown RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ZNF821O75541 412 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 CD160O95971 181 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 GPD1P21695 349 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 RRM1P23921 792 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 SLC8A1P32418 973 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 CASRP41180 1078 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 PRKCIP41743 596 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ADPRHP54922 357 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 DLG2Q15700 870 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ACBD5Q5T8D3 534 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 LINGO4Q6UY18 593 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 CLEC14AQ86T13 490 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ZSCAN1Q8NBB4 408 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 OR4C6Q8NH72 309 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 NTAN1Q96AB6 310 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 PRR11Q96HE9 360 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 MCEEQ96PE7 176 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 MUC3BQ9H195 1237 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 EVA1BQ9NVM1 165 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 PPARGC1AQ9UBK2 798 aaKnown RBP12.53□□□□□ -0.4
MRPS28-201ENST00000276585 SLC25A13Q9UJS0 675 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 FZD4Q9ULV1 537 aa12.53□□□□□ -0.4
MRPS28-201ENST00000276585 ILVBLA1L0T0 632 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.419e-10■■□□□ 11.7
MRPS28-201ENST00000276585 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-201ENST00000276585 MAGEC1O60732 1142 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
MRPS28-201ENST00000276585 LRIG2O94898 1065 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 ADH1BP00325 375 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 GP1BAP07359 652 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 CTSLP07711 333 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 ALPPL2P10696 532 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 C5AR1P21730 350 aa12.52□□□□□ -0.41
MRPS28-201ENST00000276585 ACVRL1P37023 503 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms