RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CCL16O15467 120 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 EPOP01588 193 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 MT-ND3P03897 115 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 MMP2P08253 660 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 CREB1P16220 341 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 SGSHP51688 502 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 ZXDBP98169 803 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 ARHGAP15Q53QZ3 475 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 CERCAMQ5T4B2 595 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 IL31Q6EBC2 164 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 TIFABQ6ZNK6 161 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 MAB21L3Q8N8X9 362 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 ZNF707Q96C28 371 aaPredicted RBP15.55■□□□□ 0.08
COPS3-201ENST00000268717 RANBP9Q96S59 729 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 PRKD2Q9BZL6 878 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 KCNK9Q9NPC2 374 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 PIH1D1Q9NWS0 290 aaKnown RBP15.55■□□□□ 0.08
COPS3-201ENST00000268717 MKS1Q9NXB0 559 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 NSMCE4AQ9NXX6 385 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 UBA2Q9UBT2 640 aaPredicted RBP15.55■□□□□ 0.08
COPS3-201ENST00000268717 SH3BP1Q9Y3L3 701 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
COPS3-201ENST00000268717 E2F8A0AVK6 867 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 NRG2O14511 850 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 ZWINTO95229 277 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 LUC7L3O95232 432 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 MYL4P12829 197 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 KRT4P19013 534 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 SLC18A2Q05940 514 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TTC19Q6DKK2 380 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 RNF135Q8IUD6 432 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 PGBD5Q8N414 524 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 PPHLN1Q8NEY8 458 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 OR7D4Q8NG98 312 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 OR52K2Q8NGK3 314 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 SHKBP1Q8TBC3 707 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 ZNF669Q96BR6 464 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 TMA16Q96EY4 203 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 TRIM56Q9BRZ2 755 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 EPHX3Q9H6B9 360 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TASP1Q9H6P5 420 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 ZFATQ9P243 1243 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 LOC285095A0A1B0GVY8 99 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 GMNCA6NCL1 334 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TM9SF1O15321 606 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TSPAN3O60637 253 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TBL1XO60907 577 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 PMPCBO75439 489 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 FAM107AO95990 144 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TCF3P15923 654 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 ADRA1DP25100 572 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 CD86P42081 329 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 MPP2Q14168 576 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 MPPE1Q53F39 396 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 INO80DQ53TQ3 878 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 PDPK2PQ6A1A2 396 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 SH2D5Q6ZV89 423 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 BANPQ8N9N5 519 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 SMG7Q92540 1137 aaKnown RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 FEM1CQ96JP0 617 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 FCRL3Q96P31 734 aaPredicted RBP15.54■□□□□ 0.08
COPS3-201ENST00000268717 CPNE1Q99829 537 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 APOL2Q9BQE5 337 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 SLC46A2Q9BY10 475 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 CFAP97Q9P2B7 532 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 TCAF1Q9Y4C2 921 aa15.54■□□□□ 0.08
COPS3-201ENST00000268717 A0A1W2PPM1 405 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 C2CD4DB7Z1M9 353 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 LEFTY2O00292 366 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 ATP9BO43861 1147 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 PAPSS2O95340 614 aaPredicted RBP15.53■□□□□ 0.08
COPS3-201ENST00000268717 HLA-DPA1P20036 260 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 GP5P40197 560 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 CCNFP41002 786 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 CCR2P41597 374 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 DSC2Q02487 901 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 DMTNQ08495 405 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 ITKQ08881 620 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 LAMB3Q13751 1172 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 RALGPS1Q5JS13 557 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 RNF219Q5W0B1 726 aaPredicted RBP15.53■□□□□ 0.08
COPS3-201ENST00000268717 PACS1Q6VY07 963 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
COPS3-201ENST00000268717 CMTM8Q8IZV2 173 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 KIAA1958Q8N8K9 716 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 DCAF4L2Q8NA75 395 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 BCAS4Q8TDM0 211 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 ACMSDQ8TDX5 336 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 CKAP2Q8WWK9 683 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 CHMP6Q96FZ7 201 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 CINPQ9BW66 212 aaPredicted RBP15.53■□□□□ 0.08
COPS3-201ENST00000268717 MUC3BQ9H195 1237 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 KIF9Q9HAQ2 790 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 PPANQ9NQ55 473 aaKnown RBP15.53■□□□□ 0.08
COPS3-201ENST00000268717 OR51B4Q9Y5P0 310 aa15.53■□□□□ 0.08
COPS3-201ENST00000268717 NOTCH4Q99466 2003 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms