RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 DENND1AQ8TEH3 1009 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 ALKBH8Q96BT7 664 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 MTBPQ96DY7 904 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NSMCE3Q96MG7 304 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 ZNF778Q96MU6 729 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NUDCD1Q96RS6 583 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 TRIB3Q96RU7 358 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SFXN1Q9H9B4 322 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NOD2Q9HC29 1040 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 KCNK9Q9NPC2 374 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 INTS9Q9NV88 658 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 KIAA1522Q9P206 1035 aaPredicted RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 TBC1D14Q9P2M4 693 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SMG5Q9UPR3 1016 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 TRANK1O15050 2925 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 HMX2A2RU54 273 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 FAM47DPA6NHR8 397 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 INSIG1O15503 277 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 KRT38O76015 456 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 TMCC1O94876 653 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 MT-ND3P03897 115 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 HLA-DPA1P20036 260 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 CNTFP26441 200 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 PPARDQ03181 441 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 SLC18A2Q05940 514 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 CDK18Q07002 472 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 NSUN2Q08J23 767 aaKnown RBP eCLIP16.55■□□□□ 0.24
TPM1-201ENST00000267996 LMAN2Q12907 356 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 SLC12A1Q13621 1099 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 SIRPB2Q5JXA9 342 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 PACS1Q6VY07 963 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 TIFABQ6ZNK6 161 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 TPGS1Q6ZTW0 290 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 KDELC2Q7Z4H8 507 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 ARID3BQ8IVW6 561 aaPredicted RBP16.55■□□□□ 0.24
TPM1-201ENST00000267996 APCDD1Q8J025 514 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 BHMTQ93088 406 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 ACDQ96AP0 544 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 C2orf49Q9BVC5 232 aaPredicted RBP16.55■□□□□ 0.24
TPM1-201ENST00000267996 CCDC134Q9H6E4 229 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 PIDD1Q9HB75 910 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 TREX1Q9NSU2 369 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 PLK2Q9NYY3 685 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 LHX3Q9UBR4 397 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 MYLKQ15746 1914 aa16.55■□□□□ 0.24
TPM1-201ENST00000267996 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 FGF1P05230 155 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 KRT4P19013 534 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 TEDDM1Q5T9Z0 273 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 LINGO4Q6UY18 593 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 RASSF3Q86WH2 238 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 TMEM25Q86YD3 366 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 OTUB2Q96DC9 234 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 SLC28A3Q9HAS3 691 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 PPANQ9NQ55 473 aaKnown RBP16.54■□□□□ 0.24
TPM1-201ENST00000267996 DZANK1Q9NVP4 752 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 SLC17A6Q9P2U8 582 aa16.54■□□□□ 0.24
TPM1-201ENST00000267996 ARIH1Q9Y4X5 557 aaPredicted RBP16.54■□□□□ 0.24
TPM1-201ENST00000267996 HEATR9A2RTY3 570 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 PAPSS2O95340 614 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 NDST3O95803 873 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 ARCN1P48444 511 aaKnown RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 PLEKHG6Q3KR16 790 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 RALGPS1Q5JS13 557 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 PDPK2PQ6A1A2 396 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 RETSATQ6NUM9 610 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 TMC5Q6UXY8 1006 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 KCNMB4Q86W47 210 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 IRF7Q92985 503 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 MRPL38Q96DV4 380 aaKnown RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 CPNE1Q99829 537 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 ZFATQ9P243 1243 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 INTS6Q9UL03 887 aaKnown RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 PSAT1Q9Y617 370 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 NUP210Q8TEM1 1887 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 MROH6A6NGR9 719 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 SPAG7O75391 227 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 RFPL1O75677 317 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 ARNTP27540 789 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 CD70P32970 193 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 GP5P40197 560 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 SCNN1BP51168 640 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 KIAA0930Q6ICG6 404 aaPredicted RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 ESRP1Q6NXG1 681 aaKnown RBP16.53■□□□□ 0.24
TPM1-201ENST00000267996 TMEM184AQ6ZMB5 413 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 CNTN4Q8IWV2 1026 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 IFT43Q96FT9 208 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 SGSM3Q96HU1 749 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 MCMBPQ9BTE3 642 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms