RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 KRT34O76011 436 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 PIGNO95427 931 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 BAG2O95816 211 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ARCN1P48444 511 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ZRSR2Q15696 482 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 DDR2Q16832 855 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 UGP2Q16851 508 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 PIK3R6Q5UE93 754 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF470Q6ECI4 717 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 TFAP2DQ7Z6R9 452 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF598Q86UK7 904 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 CNTN4Q8IWV2 1026 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 RDH11Q8TC12 318 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 CMTM5Q96DZ9 223 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 TTC1Q99614 292 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ILKAPQ9H0C8 392 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ENTPD7Q9NQZ7 604 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 XPR1Q9UBH6 696 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 G3BP2Q9UN86 482 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 SMNDC1O75940 238 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DDHD2O94830 711 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 SKIP12755 728 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 COX4I1P13073 169 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 ITGAXP20702 1163 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 RAB10P61026 200 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 AP2B1P63010 937 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 KLF10Q13118 480 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 CNGA3Q16281 694 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 POTEHQ6S545 545 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 FRMD7Q6ZUT3 714 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 KBTBD2Q8IY47 623 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 FSTL5Q8N475 847 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TMEM151AQ8N4L1 468 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 STYXQ8WUJ0 223 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 NXNL1Q96CM4 212 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DRC3Q9H069 523 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 WDR55Q9H6Y2 383 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TCF7L2Q9NQB0 619 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 IPO11Q9UI26 975 aaKnown RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 PPM1HQ9ULR3 514 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 ACOT9Q9Y305 439 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 RAP2CQ9Y3L5 183 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DOCK4Q8N1I0 1966 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 LIN7AO14910 233 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 CABYRO75952 493 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 STMN1P16949 149 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 NAGLUP54802 743 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 WNT3AP56704 352 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 ITKQ08881 620 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DLG1Q12959 904 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TRIM60Q495X7 471 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TMC7Q7Z402 723 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 NOL6Q9H6R4 1146 aaKnown RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 MRM3Q9HC36 420 aaKnown RBP13.04□□□□□ -0.32
CPSF6-201ENST00000266679 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 NT5MQ9NPB1 228 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 TBC1D13Q9NVG8 400 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 NDE1Q9NXR1 346 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 GMIPQ9P107 970 aa13.04□□□□□ -0.32
CPSF6-201ENST00000266679 DLX3O60479 287 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PAMP19021 973 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PAX3P23760 479 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SERPINB5P36952 375 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 OR1G1P47890 313 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CD151P48509 253 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 MAXP61244 160 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SEL1L3Q68CR1 1132 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF354CQ86Y25 554 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 GPR152Q8TDT2 470 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SGF29Q96ES7 293 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 HMCESQ96FZ2 354 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PPP1R2P1Q96PQ5 205 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 UBE2OQ9C0C9 1292 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PRDM5Q9NQX1 630 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 TREX1Q9NSU2 369 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PRUNE2Q8WUY3 3088 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 MATN2O00339 956 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 AURKAO14965 403 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CCNT2O60583 730 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CD1EP15812 388 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 GLDCP23378 1020 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms