RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PAFAH1B3Q15102 231 aaKnown RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 SDHAF4Q5VUM1 108 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 LRRC52Q8N7C0 313 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 C3orf58Q8NDZ4 430 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 HMGCLL1Q8TB92 370 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 LPGAT1Q92604 370 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 KLHL5Q96PQ7 755 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 GAD1Q99259 594 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 DCUN1D5Q9BTE7 237 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 EIF2B3Q9NR50 452 aaKnown RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 IPPQ9Y573 584 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 MYL4P12829 197 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 STMN1P16949 149 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 ARNTP27540 789 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 CLCNKBP51801 687 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 SLC12A2P55011 1212 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 PLA2G4EQ3MJ16 856 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 KCTD11Q693B1 232 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 ERO1BQ86YB8 467 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 EGFL6Q8IUX8 553 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 APLFQ8IW19 511 aaPredicted RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 RP9Q8TA86 221 aaKnown RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 OLFM1Q99784 485 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 SDHDO14521 159 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 MMP3P08254 477 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 GNAO1P09471 354 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 RPL5P46777 297 aaKnown RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 KCNC1P48547 511 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 PRKAA1Q13131 559 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 TMED1Q13445 227 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 TAC4Q86UU9 113 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 TRIML2Q8N7C3 387 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 DCBLD1Q8N8Z6 715 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 HAPLN3Q96S86 360 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 TMEM209Q96SK2 561 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 KCTD3Q9Y597 815 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 GPC4O75487 556 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 CASP2P42575 452 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 MAGEA12P43365 314 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 PPIDQ08752 370 aaKnown RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 CDH17Q12864 832 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 DYNC1I2Q13409 638 aaKnown RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 OR52K2Q8NGK3 314 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 OR6P1Q8NGX9 317 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 ANKRD49Q8WVL7 239 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 DGCR14Q96DF8 476 aaKnown RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 TEKT5Q96M29 485 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 GPR22Q99680 433 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 TMEM79Q9BSE2 394 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 FSD1LQ9BXM9 530 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 GALNT8Q9NY28 637 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 EPS15L1Q9UBC2 864 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 ASB14A6NK59 587 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 CASQ2O14958 399 aaPredicted RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 FAM58BPP0C7Q3 252 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 CCDC166P0CW27 439 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 SLC5A2P31639 672 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 DAOAP59103 153 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 MAP7Q14244 749 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 HABP4Q5JVS0 413 aaKnown RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 CHST15Q7LFX5 561 aaPredicted RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 TTC39CQ8N584 583 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 SENP8Q96LD8 212 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 CCT7Q99832 543 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 ALG9Q9H6U8 611 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 C6orf203Q9P0P8 240 aaPredicted RBP16.97■□□□□ 0.31
SQLE-201ENST00000265896 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
SQLE-201ENST00000265896 FBP2O00757 339 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 AKAP10O43572 662 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 SUPT7LO94864 414 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 SIX3O95343 332 aaPredicted RBP16.96■□□□□ 0.31
SQLE-201ENST00000265896 ASLP04424 464 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 GRIA3P42263 894 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 RAB10P61026 200 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 NSUN2Q08J23 767 aaKnown RBP eCLIP16.96■□□□□ 0.31
SQLE-201ENST00000265896 FASTKQ14296 549 aaKnown RBP16.96■□□□□ 0.31
SQLE-201ENST00000265896 SCIMPQ6UWF3 145 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 PGAM4Q8N0Y7 254 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 STYXQ8WUJ0 223 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 B3GALT6Q96L58 329 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 SENP6Q9GZR1 1112 aaPredicted RBP16.96■□□□□ 0.31
SQLE-201ENST00000265896 IL22Q9GZX6 179 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 FBXW11Q9UKB1 542 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 RNF11Q9Y3C5 154 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 TMEM114B3SHH9 223 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 PTGESO14684 152 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 DARSP14868 501 aaKnown RBP16.96■□□□□ 0.31
SQLE-201ENST00000265896 PLIN5Q00G26 463 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 SULT2A1Q06520 285 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 FAM35AQ86V20 835 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 KCNA7Q96RP8 456 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 HNRNPABQ99729 332 aaKnown RBP16.96■□□□□ 0.31
SQLE-201ENST00000265896 TBC1D30Q9Y2I9 924 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms