RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 HRO43593 1189 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 FGGP02679 453 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 DRD3P35462 400 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 ITKQ08881 620 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 HNRNPDQ14103 355 aaKnown RBP18.58■□□□□ 0.56
SDF4-201ENST00000263741 LRRC73Q5JTD7 316 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 DSG4Q86SJ6 1040 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 TEX26Q8N6G2 289 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 ZBTB44Q8NCP5 570 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 MGME1Q9BQP7 344 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 FAM53CQ9NYF3 392 aa18.58■□□□□ 0.56
SDF4-201ENST00000263741 USP36Q9P275 1121 aaKnown RBP18.58■□□□□ 0.56
SDF4-201ENST00000263741 MBD1Q9UIS9 605 aaPredicted RBP18.58■□□□□ 0.56
SDF4-201ENST00000263741 ALOX15BO15296 676 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 RNASEH2AO75792 299 aaKnown RBP18.57■□□□□ 0.56
SDF4-201ENST00000263741 RBP3P10745 1247 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 RBL1P28749 1068 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 DSC2Q02487 901 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 KCTD19Q17RG1 926 aaPredicted RBP18.57■□□□□ 0.56
SDF4-201ENST00000263741 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
SDF4-201ENST00000263741 ZNF771Q7L3S4 317 aaPredicted RBP18.57■□□□□ 0.56
SDF4-201ENST00000263741 SRLQ86TD4 932 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 HDDC3Q8N4P3 179 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 DEFB119Q8N690 84 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 CNTD1Q8N815 330 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 C1orf54Q8WWF1 131 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 AGAP3Q96P47 875 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 OSBPL9Q96SU4 736 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 FBXL12Q9NXK8 326 aa18.57■□□□□ 0.56
SDF4-201ENST00000263741 IGHV1OR15-9A0A0B4J2B8 117 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 C1QTNF3-AMACRE9PGA6 284 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 RPP40O75818 363 aaKnown RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 NEBLO76041 1014 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 PRNPP04156 253 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 P2RY2P41231 377 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 RENBPP51606 427 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 IFI35P80217 286 aaPredicted RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 CNTN1Q12860 1018 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 LPAL2Q16609 132 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 SLC45A4Q5BKX6 768 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 BZW1Q7L1Q6 419 aaKnown RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 CARD6Q9BX69 1037 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 FAM126AQ9BYI3 521 aaPredicted RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 SNX12Q9UMY4 172 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 GPR179Q6PRD1 2367 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 CCDC163A0A0D9SF12 145 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 POP4O95707 220 aaKnown RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 ADH1BP00325 375 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 CR2P20023 1033 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 PTPN3P26045 913 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 WASHC5Q12768 1159 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 IHHQ14623 411 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 SIX1Q15475 284 aaPredicted RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 USP39Q53GS9 565 aaKnown RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 PARS2Q7L3T8 475 aaKnown RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 CAMK1DQ8IU85 385 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 BBS5Q8N3I7 341 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 ATOH1Q92858 354 aaPredicted RBP18.56■□□□□ 0.56
SDF4-201ENST00000263741 KLHL32Q96NJ5 620 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 IL12RB2Q99665 862 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 PRRX2Q99811 253 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 OMDQ99983 421 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 SEMA3CQ99985 751 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 NOD2Q9HC29 1040 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 ITM2CQ9NQX7 267 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 DNPEPQ9ULA0 475 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 PCDHGA2Q9Y5H1 932 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 PLXNA2O75051 1894 aa18.56■□□□□ 0.56
SDF4-201ENST00000263741 C5AR1P21730 350 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 ACSL1P33121 698 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 PTPN5P54829 565 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 SNX1Q13596 522 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 DARS2Q6PI48 645 aaKnown RBP18.55■□□□□ 0.56
SDF4-201ENST00000263741 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.55■□□□□ 0.56
SDF4-201ENST00000263741 PLPP6Q8IY26 295 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 GAB3Q8WWW8 586 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 FATE1Q969F0 183 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 TOE1Q96GM8 510 aaKnown RBP18.55■□□□□ 0.56
SDF4-201ENST00000263741 NAPGQ99747 312 aaPredicted RBP18.55■□□□□ 0.56
SDF4-201ENST00000263741 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 SCUBE2Q9NQ36 999 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 RALGAPA1Q6GYQ0 2036 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 TRPM6Q9BX84 2022 aa18.55■□□□□ 0.56
SDF4-201ENST00000263741 PRR23AA6NEV1 266 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 ATP8B1O43520 1251 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 NIPAL4Q0D2K0 466 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 LONRF2Q1L5Z9 754 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 GDPD4Q6W3E5 623 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 LRRN4CLQ8ND94 238 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 TMIEQ8NEW7 156 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 HTR3CQ8WXA8 447 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 SPACA7Q96KW9 195 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 POLR1EQ9GZS1 481 aaKnown RBP18.54■□□□□ 0.56
SDF4-201ENST00000263741 MRFAP1Q9Y605 127 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 FAM47DPA6NHR8 397 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 KCNN4O15554 427 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 LILRB5O75023 590 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 ZBTB16Q05516 673 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 XRCC4Q13426 336 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 TUBB2AQ13885 445 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms