RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 KCNQ1P51787 676 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 MPP1Q00013 466 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 LBRQ14739 615 aaKnown RBP13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 TBCCQ15814 346 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 SNX30Q5VWJ9 437 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 KIAA1841Q6NSI8 718 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC41A1Q8IVJ1 513 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 C2CD4AQ8NCU7 369 aaPredicted RBP13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 SORT1Q99523 831 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 BTBD10Q9BSF8 475 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 PPP1R12CQ9BZL4 782 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 RETREG1Q9H6L5 497 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
SPTLC1-201ENST00000262554 FAM95CA0A1B0GW59 222 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ACSL4O60488 711 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 PRAMEF11O60813 436 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 TRIM13O60858 407 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 EFEMP2O95967 443 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SERPINA6P08185 405 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 STMN1P16949 149 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 RPL17P18621 184 aaKnown RBP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 CRABP2P29373 138 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ETFBP38117 255 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 CD151P48509 253 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC11A2P49281 568 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 RAB10P61026 200 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 TSTD2Q5T7W7 516 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 TMCO4Q5TGY1 634 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 NEPROQ6NW34 567 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ANKRD33Q7Z3H0 272 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 OR6Y1Q8NGX8 325 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SCYL1Q96KG9 808 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 POLR1EQ9GZS1 481 aaKnown RBP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ARMCX1Q9P291 453 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 FBXO5Q9UKT4 447 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 ACOT9Q9Y305 439 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 PCDHB12Q9Y5F1 795 aa13.07□□□□□ -0.32
SPTLC1-201ENST00000262554 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 GYG2O15488 501 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 PAPSS2O95340 614 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 HSPA4LO95757 839 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 CCND1P24385 295 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ACVRL1P37023 503 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 AVPR1AP37288 418 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 PRKAA2P54646 552 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC12A2P55011 1212 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 IKBKEQ14164 716 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ZNF235Q14590 738 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 RABGAP1LQ5R372 815 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 PGBD5Q8N414 524 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ARRDC2Q8TBH0 407 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 IGSF21Q96ID5 467 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ZNF599Q96NL3 588 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 EBF4Q9BQW3 602 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 DNAJC28Q9NX36 388 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 AFF4Q9UHB7 1163 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 RUVBL2Q9Y230 463 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 CHD5Q8TDI0 1954 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 A0A087X1B8 175 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 SLC6A4P31645 630 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ALDH18A1P54886 795 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 POU4F1Q01851 419 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ICE2Q659A1 982 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 KLHDC10Q6PID8 442 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 ZYG11AQ6WRX3 759 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.323e-8■■□□□ 13.9
SPTLC1-201ENST00000262554 CFAP52Q8N1V2 620 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 GPATCH11Q8N954 259 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 AGAP11Q8TF27 550 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 MYEOVQ96EZ4 313 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 MAGEH1Q9H213 219 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 CWH43Q9H720 699 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 PNPOQ9NVS9 261 aa13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 CPSF2Q9P2I0 782 aaKnown RBP13.06□□□□□ -0.32
SPTLC1-201ENST00000262554 HSFX1Q9UBD0 423 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms