RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PQLC1Q8N2U9 271 aa22.87■■□□□ 1.25
MCF2L-201ENST00000261963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.87■■□□□ 1.25
MCF2L-201ENST00000261963 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
MCF2L-201ENST00000261963 VPS39Q96JC1 886 aa22.87■■□□□ 1.25
MCF2L-201ENST00000261963 CNBD2Q96M20 576 aa22.87■■□□□ 1.25
MCF2L-201ENST00000261963 PRPF18Q99633 342 aaKnown RBP22.87■■□□□ 1.25
MCF2L-201ENST00000261963 PAIP2BQ9ULR5 123 aaKnown RBP22.87■■□□□ 1.25
MCF2L-201ENST00000261963 PSMD13Q9UNM6 376 aa22.87■■□□□ 1.25
MCF2L-201ENST00000261963 KPNA6O60684 536 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PGK1P00558 417 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 CTGFP29279 349 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 CD52P31358 61 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 MYBPC1Q00872 1141 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 GPR162Q16538 588 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 TRIM67Q6ZTA4 783 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 RASAL3Q86YV0 1011 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 SPATA22Q8NHS9 363 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 CMTM5Q96DZ9 223 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 KIFC1Q9BW19 673 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 ARHGEF38Q9NXL2 777 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PCDHGB4Q9UN71 923 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PCDHGB5Q9Y5G0 923 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 AP4B1Q9Y6B7 739 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 CCDC78A2IDD5 438 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-201ENST00000261963 GPR182O15218 404 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 TIMM44O43615 452 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 NR1H2P55055 460 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PLOD1Q02809 727 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-201ENST00000261963 NAPEPLDQ6IQ20 393 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 FNDC8Q8TC99 324 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 SIK2Q9H0K1 926 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 TBCCD1Q9NVR7 557 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 PADI3Q9ULW8 664 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 AK5Q9Y6K8 562 aa22.86■■□□□ 1.25
MCF2L-201ENST00000261963 TNPO2O14787 897 aaKnown RBP22.85■■□□□ 1.25
MCF2L-201ENST00000261963 SUPT3HO75486 399 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 ITGAXP20702 1163 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 PGFP49763 221 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 ZNF33AQ06730 810 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 IYDQ6PHW0 289 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 EFCAB3Q8N7B9 438 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 SHCBP1LQ9BZQ2 653 aa22.85■■□□□ 1.25
MCF2L-201ENST00000261963 DFFAO00273 331 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 IRAK2O43187 625 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 ZNF623O75123 536 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 APOFQ13790 326 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 PRPSAP1Q14558 356 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 LPIN1Q14693 890 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 GRM3Q14832 879 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 ADRM1Q16186 407 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 METTL23Q86XA0 190 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 HSPBAP1Q96EW2 488 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 FAM96AQ9H5X1 160 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.84■■□□□ 1.25
MCF2L-201ENST00000261963 H3BSA7 217 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 M0QZQ0 153 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 FAM58BPP0C7Q3 252 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 RARS2Q5T160 578 aaKnown RBP22.84■■□□□ 1.25
MCF2L-201ENST00000261963 ZNF781Q8N8C0 355 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 GPR22Q99680 433 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 NMRAL1Q9HBL8 299 aa22.84■■□□□ 1.25
MCF2L-201ENST00000261963 MT-CYBP00156 380 aaPredicted RBP22.83■■□□□ 1.25
MCF2L-201ENST00000261963 ITGB1P05556 798 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 MYL4P12829 197 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CCNCP24863 283 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CD97P48960 835 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 PGGT1BP53609 377 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 ITGA7Q13683 1181 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 USP41Q3LFD5 358 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 SLC44A4Q53GD3 710 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 BEND5Q7L4P6 421 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 ZC3HC1Q86WB0 502 aaKnown RBP22.83■■□□□ 1.25
MCF2L-201ENST00000261963 SLC39A10Q9ULF5 831 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CEPT1Q9Y6K0 416 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 F8W810 466 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CDH2P19022 906 aaPredicted RBP22.83■■□□□ 1.25
MCF2L-201ENST00000261963 GABRB3P28472 473 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 HOXC13P31276 330 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CYP2C18P33260 490 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 MTTPP55157 894 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 MANEALQ5VSG8 457 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 PDPK2PQ6A1A2 396 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 TMEM151AQ8N4L1 468 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CATSPER1Q8NEC5 780 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 RSPH1Q8WYR4 309 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 LRGUKQ96M69 825 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 C1QTNF1Q9BXJ1 281 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 CDH19Q9H159 772 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 FAIMQ9NVQ4 179 aa22.83■■□□□ 1.25
MCF2L-201ENST00000261963 MANSC4A6NHS7 340 aaPredicted RBP22.82■■□□□ 1.24
MCF2L-201ENST00000261963 PAGE1O75459 146 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 CYBAP13498 195 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 DSC3Q14574 896 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 DENND5AQ6IQ26 1287 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 LINC00523Q86TU6 105 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 CROCCP3Q8IVE0 287 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 ATPAF2Q8N5M1 289 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 PHF12Q96QT6 1004 aa22.82■■□□□ 1.24
MCF2L-201ENST00000261963 COG4Q9H9E3 785 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms