RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NRAPQ86VF7 1730 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NUMA1Q14980 2115 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ABHD14A-ACY1A0A1B0GW23 586 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SNAP23O00161 211 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CACNB4O00305 520 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 KITP10721 976 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TCF3P15923 654 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CD44P16070 742 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ATP6V1C1P21283 382 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NUDT1P36639 197 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 BNC1Q01954 994 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PMF1Q6P1K2 205 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CREG2Q8IUH2 290 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 C15orf40Q8WUR7 153 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJB3Q8WWF6 145 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SLC22A18Q96BI1 424 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 OXNAD1Q96HP4 312 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 KLF6Q99612 283 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 GBA3Q9H227 469 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MAGEL2Q9UJ55 1249 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PRG3Q9Y2Y8 225 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TNRC6CQ9HCJ0 1690 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NCOR1O75376 2440 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM24O15164 1050 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TULP3O75386 442 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 HRH2P25021 359 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 HNMTP50135 292 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MTF1Q14872 753 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NR6A1Q15406 480 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TRIP10Q15642 601 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PCSK7Q16549 785 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SMTNL2Q2TAL5 461 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 GPR33Q49SQ1 333 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SLC30A9Q6PML9 568 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CASP12Q6UXS9 341 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DHFR2Q86XF0 187 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PDPRQ8NCN5 879 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 OR52L1Q8NGH7 329 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ROPN1LQ96C74 230 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MTF2Q9Y483 593 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 hCG_1818297A0A087WSY0 165 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SOBPA7XYQ1 873 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NUDT2P50583 147 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 THOP1P52888 689 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 RAB25P57735 213 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CACNG1Q06432 222 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 HERC3Q15034 1050 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DEFB115Q30KQ5 88 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM26Q6ZUK4 368 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SHDQ96IW2 340 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FAM111AQ96PZ2 611 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NAALADL1Q9UQQ1 740 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 KCNE2Q9Y6J6 123 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 AP1M2Q9Y6Q5 423 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ESYT3A0FGR9 886 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 RGSL1A5PLK6 1076 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MAP2K7O14733 419 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 GLUD1P00367 558 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 KCNA3P22001 575 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PRKG2Q13237 762 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CYP1B1Q16678 543 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CNTD1Q8N815 330 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PSMA8Q8TAA3 256 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CKAP2Q8WWK9 683 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 USP7Q93009 1102 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TOP1MTQ969P6 601 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PI4K2AQ9BTU6 479 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 C11orf84Q9BUA3 381 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 OSBPL11Q9BXB4 747 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CDT1Q9H211 546 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FAM105AQ9NUU6 356 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SESN1Q9Y6P5 492 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 H3BM21 787 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NDST3O95803 873 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TPP2P29144 1249 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FSTL1Q12841 308 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FASTKQ14296 549 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TEAD4Q15561 434 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM71Q2Q1W2 868 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CBWD3Q5JTY5 395 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CBWD5Q5RIA9 395 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DEPDC1Q5TB30 811 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CYP20A1Q6UW02 462 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 USP49Q70CQ1 688 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC80Q76M96 950 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ADGRA1Q86SQ6 560 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SLC25A51Q9H1U9 297 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 EVA1AQ9H8M9 152 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CLIC5Q9NZA1 410 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MTRRQ9UBK8 725 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJB4Q9UDY4 337 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 AFF4Q9UHB7 1163 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 GSTK1Q9Y2Q3 226 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MYH7BA7E2Y1 1941 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 A0A096LPK6 155 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CYTH3O43739 400 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ACSM2AQ08AH3 577 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ACSM2BQ68CK6 577 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 LGI2Q8N0V4 545 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM174Q8WUU8 243 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms