RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ST8SIA2Q92186 375 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SNAPC3Q92966 411 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CNOT6LQ96LI5 555 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 NSMCE2Q96MF7 247 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ROGDIQ9GZN7 287 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GLTPQ9NZD2 209 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TIMM22Q9Y584 194 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PPP2R3BQ9Y5P8 575 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 IFRD1O00458 451 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SH2B2O14492 632 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TBX1O43435 398 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ADH1CP00326 375 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DHFRP00374 187 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MTHFD1P11586 935 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PIK3CGP48736 1102 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 FMR1Q06787 632 aaKnown RBP eCLIP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MAB21L1Q13394 359 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SEC23BQ15437 767 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 UGT3A1Q6NUS8 523 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DDIASQ8IXT1 998 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 LMAN2LQ9H0V9 348 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PDGFCQ9NRA1 345 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 USE1Q9NZ43 259 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SMARCAL1Q9NZC9 954 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SIRPGQ9P1W8 387 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 GRIP1Q9Y3R0 1128 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DGKBQ9Y6T7 804 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NRXN3Q9Y4C0 1643 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SLIT3O75094 1523 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PIPSLA2A3N6 862 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SNAPC5O75971 98 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 APOC3P02656 99 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CSF1RP07333 972 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ACSL1P33121 698 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NUDT2P50583 147 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 HIRAP54198 1017 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 EIF3EP60228 445 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TSPAN5P62079 268 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 FBXO43Q4G163 708 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 HYIQ5T013 277 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF57Q68EA5 555 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PLEKHG7Q6ZR37 379 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ATG9AQ7Z3C6 839 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC5A11Q8WWX8 675 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NCOR1P1Q9H4R4 102 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MCCC2Q9HCC0 563 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PSMC3IPQ9P2W1 217 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 LRFN2Q9ULH4 789 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SORCS3Q9UPU3 1222 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TPRKBQ9Y3C4 175 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 WASF2Q9Y6W5 498 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NWD1Q149M9 1564 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 LOC100653049A0A140TA62 436 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 GNG14A0A1W2PPG7 69 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 WNT7AO00755 349 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 C2CD2LO14523 706 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 KRT34O76011 436 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 HOXB1P14653 301 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 IDUAP35475 653 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC1A4P43007 532 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ARHGDIBP52566 201 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 GABPAQ06546 454 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SCN1BQ07699 218 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ACSBG2Q5FVE4 666 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 FBXO42Q6P3S6 717 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PGBD2Q6P3X8 592 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SV2BQ7L1I2 683 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SLFN11Q7Z7L1 901 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 FOXRED2Q8IWF2 684 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ZFP28Q8NHY6 868 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 RSAD2Q8WXG1 361 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NCSTNQ92542 709 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC106Q9BWC9 280 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 LIN28AQ9H9Z2 209 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 GPSM3Q9Y4H4 160 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC195A0A1B0GUA6 201 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ALOX15BO15296 676 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PGK1P00558 417 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 RARGP13631 454 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 RPS7P62081 194 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ABRQ12979 859 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DLG2Q15700 870 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 NRF1Q16656 503 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DOK7Q18PE1 504 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TIMM50Q3ZCQ8 353 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MROH9Q5TGP6 573 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SCYL2Q6P3W7 929 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CCBE1Q6UXH8 406 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TANKQ92844 425 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 HDAC11Q96DB2 347 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 HEXIM2Q96MH2 286 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 SP110Q9HB58 689 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CACYBPQ9HB71 228 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ALG13Q9NP73 1137 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MINPP1Q9UNW1 487 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 EIF3LQ9Y262 564 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms